Fluviicola taffensis DSM 16823, Contig 130
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4093 predicted CDSs,
74 long genes,
77 short genes,
15 broken genes,
12 interrupted genes,
122 intergenic regions with hits,
300 total anomalies.
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View pseudogenes 		Gene prediction anomalies
Chart?chtt=&chs=400x180&chd=s:aanaaaa9&cht=p3&chl=long-1%%7cshort-1%%7cunique-18%%7cdubious-0%%7cbroken-0%%7cinterrupted-0%%7cambiguous-0%%7cok-80% 		Anomaly distribution
Chart?chtt=&chs=500x180&chd=s:kmhg9&cht=p3&chl=long-24%%7cshort-25%%7cbroken-5%%7cinterrupted-4%%7cputative+missed-40%
Defectlist
Alns
  1. or0001
    • Dubious
  2. or0003
    • Overlap with or0004(73)
  3. or0002-or0004
    • Intergenic region with hits
  4. or0038-or0041
    • Intergenic region with hits
  5. or0073-or0077
    • Intergenic region with hits
  6. or0092-or0094
    • Intergenic region with hits
  7. or0095
    • SHORT
  8. or0109-or0111
    • Intergenic region with hits
  9. or0111
    • Overlap with or0112(58)
  10. or0112
    • Overlap with or0111(58)
  11. or0120
    • LONG
  12. or0125
    • LONG
  13. or0129-or0130
    • Intergenic region with hits
  14. or0168-or0169
    • Intergenic region with hits
  15. or0199
    • Overlap with or0200(43)
  16. or0200
    • Overlap with or0199(43)
  17. or0205-or0206
    • Intergenic region with hits
  18. or0224
  19. or0224-or0225
    • Intergenic region with hits
  20. or0225
  21. or0250
    • SHORT
  22. or0274
    • LONG
  23. or0319-or0322
    • Intergenic region with hits
  24. or0344
    • SHORT
  25. or0344-or0347
    • Intergenic region with hits
  26. or0347-or0348
    • Intergenic region with hits
  27. or0375-or0378
    • Intergenic region with hits
  28. or0380-or0383
    • Intergenic region with hits
  29. or0390-or0391
    • Intergenic region with hits
  30. or0395-or0398
    • Intergenic region with hits
  31. or0403-or0404
    • Intergenic region with hits
  32. or0432
    • LONG
  33. or0443
    • Overlap with or0444(31)
  34. or0444
    • Overlap with or0443(31)
  35. or0455
    • LONG
  36. or0465-RNA_38
    • Intergenic region with hits
  37. or0466-or0469
    • Intergenic region with hits
  38. or0498
    • SHORT
  39. or0499
    • SHORT
  40. or0508
    • LONG
  41. or0508-or0510
    • Intergenic region with hits
  42. or0516
    • Overlap with or0517(46)
  43. or0517
    • Overlap with or0516(46)
  44. or0542-or0545
    • Intergenic region with hits
  45. or0566
    • SHORT
  46. or0582
    • SHORT
  47. or0588
    • LONG
  48. or0594
    • LONG
  49. or0611
    • SHORT
  50. or0613
    • Overlap with or0614(36)
  51. or0614
    • Overlap with or0613(36)
  52. or0635
    • SHORT
  53. or0638-or0640
    • Intergenic region with hits
  54. or0649-or0653
    • Intergenic region with hits
  55. or0653-or0660
    • Intergenic region with hits
  56. or0667
    • LONG
  57. or0676
    • LONG
  58. or0680-or0681
    • Intergenic region with hits
  59. or0710
    • LONG
  60. or0716
    • LONG
  61. or0732-or0733
    • Intergenic region with hits
  62. or0744-RNA_36
    • Intergenic region with hits
  63. or0758-or0760
    • Intergenic region with hits
  64. or0765-or0768
    • Intergenic region with hits
  65. or0775
    • LONG
  66. or0874
    • SHORT
  67. or0876
    • LONG
  68. or0898
    • Overlap with or0899(36)
  69. or0899
    • LONG
    • Overlap with or0898(36)
  70. or0929-or0930
    • Intergenic region with hits
  71. or0965
    • LONG gene with <100 nt promoter
  72. or0984
    • LONG
  73. or0997
    • SHORT
  74. or1007
    • SHORT
  75. or1009
    • SHORT
  76. or1031
    • LONG
  77. or1034
    • SHORT
  78. or1096
    • LONG
  79. or1101
    • SHORT
  80. or1104
    • LONG
  81. or1110
    • Overlap with or1111(58)
  82. or1111
    • Overlap with or1110(58)
  83. or1111-or1116
    • Intergenic region with hits
  84. or1116
    • SHORT
  85. or1116-or1118
    • Intergenic region with hits
  86. or1118-or1119
    • Intergenic region with hits
  87. or1119
    • SHORT
  88. or1120
    • SHORT
  89. or1138
    • LONG
  90. or1148-or1151
    • Intergenic region with hits
  91. or1151
    • SHORT
  92. or1155
    • SHORT
  93. or1172-or1173
    • Intergenic region with hits
  94. or1191
    • SHORT
  95. or1196
    • SHORT
  96. or1206
    • SHORT
  97. or1207
    • LONG
  98. or1211
    • Overlap with or1212(52)
  99. or1212
    • Overlap with or1211(52)
  100. or1225
    • Overlap with or1226(40)
  101. or1226
    • Overlap with or1225(40)
  102. or1261
    • SHORT
  103. or1265
    • LONG
  104. or1307
    • LONG
  105. or1320
    • SHORT gene with BLASTx hit
  106. or1320-or1321
    • Intergenic region with hits
  107. or1329
    • Overlap with or1328(49)
  108. or1352
    • SHORT
  109. or1361-or1362
    • Intergenic region with hits
  110. or1367-or1369
    • Intergenic region with hits
  111. or1371
    • SHORT
  112. or1373
    • LONG
  113. or1374
    • LONG
  114. or1377-or1380
    • Intergenic region with hits
  115. or1405
    • SHORT
  116. or1451
    • LONG
  117. or1453
    • LONG
  118. or1474
    • Overlap with or1475(40)
  119. or1477
    • LONG
  120. or1496
    • LONG
  121. or1521
    • Overlap with or1522(37)
  122. or1522
    • Overlap with or1521(37)
  123. or1543
    • SHORT
  124. or1548
    • Overlap with or1549(34)
  125. or1549
    • Overlap with or1548(34)
  126. or1554
    • Overlap with or1555(31)
  127. or1555
    • Overlap with or1554(31)
  128. or1556
    • SHORT
  129. or1556-or1558
    • Intergenic region with hits
  130. or1577
    • SHORT
  131. or1582
    • SHORT
  132. or1607-or1614
    • Intergenic region with hits
  133. or1624-or1626
    • Intergenic region with hits
  134. or1629
    • LONG
  135. or1656-or1660
    • Intergenic region with hits
  136. or1679-or1681
    • Intergenic region with hits
  137. or1732
    • Overlap with or1733(55)
  138. or1733
    • Overlap with or1732(55)
  139. or1738
    • Overlap with or1739(147)
  140. or1739
    • Overlap with or1740(61)
  141. or1740
    • Overlap with or1739(61)
  142. or1742
    • LONG
  143. or1782
    • LONG
  144. or1799-or1801
    • Intergenic region with hits
  145. or1801
    • SHORT
  146. or1839
    • LONG
  147. or1879
    • LONG
  148. or1882
    • SHORT
  149. or1907-or1909
    • Intergenic region with hits
  150. or1916
    • SHORT
  151. or1919
    • Overlap with or1920(34)
  152. or1921-RNA_34
    • Intergenic region with hits
  153. or1929
    • LONG
  154. or1957-or1961
    • Intergenic region with hits
  155. or1962-or1966
    • Intergenic region with hits
  156. or1993
    • Overlap with or1994(31)
  157. or1994
    • Overlap with or1993(31)
  158. or1997
    • LONG
  159. or2008
    • SHORT
    • Overlap with or2009(107)
  160. or2009
    • Overlap with or2008(107)
  161. or2010
    • SHORT
  162. or2035
  163. or2036
  164. or2044-or2046
    • Intergenic region with hits
  165. or2054
    • LONG gene with <100 nt promoter
  166. or2077-or2078
    • Intergenic region with hits
  167. or2114
    • LONG
  168. or2133
    • Overlap with or2134(34)
  169. or2134
    • Overlap with or2133(34)
  170. or2142
    • SHORT
  171. or2154
    • SHORT
  172. or2157-or2160
    • Intergenic region with hits
  173. or2172-or2173
    • Intergenic region with hits
  174. or2179
    • SHORT
  175. or2196
    • Overlap with or2197(60)
  176. or2197
    • LONG
    • Overlap with or2196(60)
  177. or2217-or2218
    • Intergenic region with hits
  178. or2238
    • Overlap with or2239(31)
  179. or2239
    • Overlap with or2238(31)
  180. or2264-or2266
    • Intergenic region with hits
  181. or2293
    • LONG
  182. or2303-or2306
    • Intergenic region with hits
  183. or2306-or2309
    • Intergenic region with hits
  184. or2331
    • LONG
    • Overlap with or2332(31)
  185. or2332
    • Overlap with or2331(31)
  186. or2334-or2336
    • Intergenic region with hits
  187. or2351
    • LONG
  188. or2373
    • LONG
    • Overlap with or2372(46)
  189. or2385
    • LONG
  190. or2388
    • LONG
  191. or2389
    • SHORT
  192. or2391-or2393
    • Intergenic region with hits
  193. or2393
    • SHORT
  194. or2414
    • SHORT
  195. or2416-or2417
    • Intergenic region with hits
  196. or2433-or2434
    • Intergenic region with hits
  197. or2434-or2436
    • Intergenic region with hits
  198. or2443
    • Overlap with or2444(40)
  199. or2444
    • Overlap with or2443(40)
  200. or2453
    • SHORT
  201. or2465-or2468
    • Intergenic region with hits
  202. or2468-or2471
    • Intergenic region with hits
  203. or2471
    • SHORT
  204. or2473
    • SHORT
  205. or2473-or2475
    • Intergenic region with hits
  206. or2479-or2482
    • Intergenic region with hits
  207. or2507-or2510
    • Intergenic region with hits
  208. or_CrispR1
    • CrispR or_CrispR1 CRISPR + 2881768 2887121 rpt_unit_range="2881768..2881815"
  209. or2533
    • SHORT
  210. or2542
    • LONG
  211. or2549
    • LONG gene with <100 nt promoter
  212. or2558
    • LONG
  213. or2571
    • Overlap with or2572(55)
  214. or2572
    • Overlap with or2571(55)
  215. or2582-or2583
    • Intergenic region with hits
  216. or2583
    • SHORT
  217. or2589
    • LONG
  218. or2589-or2591
    • Intergenic region with hits
  219. or2594
    • SHORT
  220. or2598-or2599
    • Intergenic region with hits
  221. or2609
    • SHORT
  222. or2627
    • LONG gene with <100 nt promoter
  223. or2662-or2663
    • Intergenic region with hits
  224. or2668
    • SHORT
  225. or2670
    • LONG gene with <100 nt promoter
  226. or2691
    • LONG
  227. or2717
    • LONG
  228. or2726
    • Overlap with or2727(61)
  229. or2728
    • LONG
  230. or2747-or2748
    • Intergenic region with hits
  231. or2748
  232. or2767
    • SHORT
  233. or2772
    • Overlap with or2773(43)
  234. or2773
    • Overlap with or2772(43)
  235. or2776
    • SHORT
  236. or2777
    • LONG gene with <100 nt promoter
  237. or2781-or2783
    • Intergenic region with hits
  238. or2788
    • LONG
  239. or2789-or2794
    • Intergenic region with hits
  240. or2799
    • SHORT
  241. or2803
    • SHORT
  242. or2808
    • Overlap with or2809(58)
  243. or2809
    • Overlap with or2808(58)
  244. or2820
    • LONG
  245. or2821
    • LONG
  246. or2855
    • SHORT
  247. or2855-or2856
    • Intergenic region with hits
  248. or2866
    • SHORT
  249. or2866-or2870
    • Intergenic region with hits
  250. or2872-or2875
    • Intergenic region with hits
  251. or2890-or2893
    • Intergenic region with hits
  252. RNA_16-or2910
    • Intergenic region with hits
  253. or2910
    • SHORT
  254. or2932-or2933
    • Intergenic region with hits
  255. or2973
    • Overlap with or2974(31)
  256. or2974
    • Overlap with or2973(31)
  257. or2980
    • SHORT
  258. or2990
    • SHORT
  259. or2992
    • LONG
  260. or2992-or2995
    • Intergenic region with hits
  261. or2996
    • SHORT
  262. or3021
    • LONG
  263. or3040
    • LONG
  264. or3055
    • SHORT
  265. or3064-or3066
    • Intergenic region with hits
  266. or3076-or3081
    • Intergenic region with hits
  267. or3090-or3092
    • Intergenic region with hits
  268. or3092-or3093
    • Intergenic region with hits
  269. or3094
  270. or3095
  271. or3095-or3096
    • Intergenic region with hits
  272. or3096-or3098
    • Intergenic region with hits
  273. or3123-or3126
    • Intergenic region with hits
  274. or3128-or3129
    • Intergenic region with hits
  275. or3129
    • SHORT
  276. or3130
    • SHORT
  277. or3166
  278. or3167
  279. or3169
    • SHORT
  280. or3173-or3177
    • Intergenic region with hits
  281. or3182-or3185
    • Intergenic region with hits
  282. or3189-or3191
    • Intergenic region with hits
  283. or3192
    • LONG
  284. or3197-or3198
    • Intergenic region with hits
  285. or3210
    • Overlap with or3211(31)
  286. or3211
    • Overlap with or3210(31)
  287. or3209-or3214
    • Intergenic region with hits
  288. or3215
    • Overlap with or3216(36)
  289. or3216
    • Overlap with or3215(36)
  290. or3222
    • SHORT
  291. or3222-or3227
    • Intergenic region with hits
  292. or3228-or3233
    • Intergenic region with hits
  293. or3245-Newfeat9
    • Intergenic region with hits
  294. or3264-or3267
    • Intergenic region with hits
  295. or3271
  296. or3272
  297. or3273
    • SHORT
  298. or3273-or3274
    • Intergenic region with hits
  299. or3293
    • Overlap with or3294(45)
  300. or3334-or3336
    • Intergenic region with hits
  301. or3341
    • LONG
  302. or3365-or3366
    • Intergenic region with hits
  303. or3366
    • SHORT
  304. or3398
  305. or3399
  306. or3460
    • LONG
  307. or3476-or3478
    • Intergenic region with hits
  308. or3484
    • Overlap with or3485(65)
  309. or3485
    • Overlap with or3484(65)
  310. or3525
    • SHORT
  311. or3606
    • LONG gene with <100 nt promoter
  312. or3631-or3633
    • Intergenic region with hits
  313. or3655-or3656
    • Intergenic region with hits
  314. or3670
    • SHORT
  315. or3672
    • Overlap with or3673(37)
  316. or3673
    • Overlap with or3672(37)
  317. or3730-or3731
    • Intergenic region with hits
  318. or3731-or3732
    • Intergenic region with hits
  319. or3748
    • SHORT
  320. or3755
    • LONG
  321. or3762
    • SHORT
  322. or3797-or3801
    • Intergenic region with hits
  323. or3811
    • SHORT
  324. or3811-or3813
    • Intergenic region with hits
  325. or3813-or3821
    • Intergenic region with hits
  326. or3826
    • Overlap with or3827(31)
  327. or3827
    • Overlap with or3826(31)
  328. or3829
    • Overlap with or3828(31)
  329. or3847
    • SHORT
  330. or3864
    • SHORT
  331. or3864-or3865
    • Intergenic region with hits
  332. or3892
    • SHORT
  333. or3897-or3898
    • Intergenic region with hits
  334. or3899
    • Overlap with or3900(55)
  335. or3900
    • Overlap with or3899(55)
  336. or3905-or3908
    • Intergenic region with hits
  337. or3913
  338. or3914
  339. or3914-or3920
    • Intergenic region with hits
  340. or3920-or3922
    • Intergenic region with hits
  341. or3926
    • LONG
  342. or3934-or3935
    • Intergenic region with hits
  343. or3943-or3944
    • Intergenic region with hits
  344. or3944
    • LONG
  345. or3947-or3948
    • Intergenic region with hits
  346. or3949-or3952
    • Intergenic region with hits
  347. or3975
    • Overlap with or3976(54)
  348. or3976
    • Overlap with or3977(37)
  349. or3977
    • Overlap with or3976(37)
  350. or3982
    • LONG gene with <100 nt promoter
  351. or3989
    • LONG
  352. or4008-or4010
    • Intergenic region with hits
  353. or4038-or4039
    • Intergenic region with hits
  354. or4042
    • LONG
  355. or4057
    • SHORT
  356. or4058-or4059
    • Intergenic region with hits
  357. or4063
    • LONG
  358. or4073
    • LONG
  359. or4093-or4094
    • Intergenic region with hits
Click on an anomaly in the left bar to view the associated alignment.