Thermoanaerobacter brocki subsp. finnii Ako-1 DSM 3389, Contig 634
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2303 predicted CDSs,
8 long genes,
42 short genes,
45 broken genes,
27 interrupted genes,
252 intergenic regions with hits,
374 total anomalies.
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View pseudogenes 		Gene prediction anomalies
Chart?chtt=&chs=400x180&chd=s:aaaaaaa9&cht=p3&chl=long-0%%7cshort-1%%7cunique-1%%7cdubious-0%%7cbroken-1%%7cinterrupted-1%%7cambiguous-0%%7cok-96% 		Anomaly distribution
Chart?chtt=&chs=500x180&chd=s:bkkg9&cht=p3&chl=long-2%%7cshort-11%%7cbroken-12%%7cinterrupted-7%%7cputative+missed-67%
Defectlist
Alns
  1. or0008-or0009
    • Intergenic region with hits
  2. or0011-or0012
    • Intergenic region with hits
  3. or0024-or0025
    • Intergenic region with hits
  4. or0025
    • SHORT
  5. or0025-or0026
    • Intergenic region with hits
  6. or0027-or0028
    • Intergenic region with hits
  7. RNA_2-RNA_3
    • Intergenic region with hits
  8. or0050-or0051
    • Intergenic region with hits
  9. or0051-or0052
    • Intergenic region with hits
  10. or0060-or0061
    • Intergenic region with hits
  11. or0066
    • Overlap with or0067(31)
  12. or0067
    • Overlap with or0066(31)
  13. or0073-or0074
    • Intergenic region with hits
  14. or0076-or0078
    • Intergenic region with hits
  15. or0080
    • SHORT
  16. or0086
    • Overlap with or0087(31)
  17. or0087
    • Overlap with or0086(31)
  18. or0087-or0088
    • Intergenic region with hits
  19. or0091-or0092
    • Intergenic region with hits
  20. or0102-or0103
    • Intergenic region with hits
  21. or0103-or0104
    • Intergenic region with hits
  22. or0113-or0114
    • Intergenic region with hits
  23. or0116
  24. or0117
    • LONG
  25. or_CrispR1
    • CrispR or_CrispR1 CRISPR + 121660 124831 rpt_unit_range="121660..121690"
  26. or0133
    • Interrupted gene with or0136 
  27. or0134-or_CrispR2
    • Intergenic region with hits
  28. or_CrispR2
    • CrispR or_CrispR2 CRISPR + 126529 127963 rpt_unit_range="126529..126559"
  29. or0135
  30. or0136
  31. or0136-or0137
    • Intergenic region with hits
  32. or0137
  33. or0137-or_CrispR3
    • Intergenic region with hits
  34. or_CrispR3
    • CrispR or_CrispR3 CRISPR + 131317 133488 rpt_unit_range="131317..131347"
  35. or0138-or_CrispR4
    • Intergenic region with hits
  36. or_CrispR4
    • CrispR or_CrispR4 CRISPR + 135184 136814 rpt_unit_range="135184..135214"
  37. or0145-or0146
    • Intergenic region with hits
  38. or0146-or0147
    • Intergenic region with hits
  39. or0156-or0157
    • Intergenic region with hits
  40. or0157
  41. or0158
  42. or0159
  43. or0159-or0160
    • Intergenic region with hits
  44. or0160
    • Overlap with or0161(34)
  45. or0161
    • Overlap with or0160(34)
  46. or0172-or0173
    • Intergenic region with hits
  47. or0173-or0174
    • Intergenic region with hits
  48. or0209-or0210
    • Intergenic region with hits
  49. or0223-or0224
    • Intergenic region with hits
  50. or0232-or0233
    • Intergenic region with hits
  51. or0242
    • SHORT
  52. or0245
    • Broken gene with or0245  or0246 
    • Interrupted gene with or0246 
    • Overlap with or0246(58)
  53. or0246
    • Broken gene with or0245  or0246 
    • Interrupted gene with or0245 
    • Overlap with or0245(58)
  54. or0249
  55. or0250
  56. or0253-or0254
    • Intergenic region with hits
  57. or0256
    • SHORT
  58. or0281
    • SHORT
  59. or0281-or0282
    • Intergenic region with hits
  60. or0283
    • SHORT
  61. or0287
    • Overlap with or0288(37)
  62. or0288
    • Overlap with or0287(37)
  63. or0289-or0290
    • Intergenic region with hits
  64. or0295-or0296
    • Intergenic region with hits
  65. or0296
    • SHORT
  66. or0299-or0300
    • Intergenic region with hits
  67. or0307-or0308
    • Intergenic region with hits
  68. or0308-or0309
    • Intergenic region with hits
  69. or0309-or0310
    • Intergenic region with hits
  70. or0332-or0333
    • Intergenic region with hits
  71. or0347
  72. or0348
  73. or0354
    • LONG
  74. or0358-or0359
    • Intergenic region with hits
  75. or0373-or0374
    • Intergenic region with hits
  76. Newfeat4-RNA_11
    • Intergenic region with hits
  77. or0426
    • Overlap with or0427(34)
  78. or0427
    • Overlap with or0426(34)
  79. or0431-or0432
    • Intergenic region with hits
  80. or0432
    • SHORT
  81. or0432-or0433
    • Intergenic region with hits
  82. or0435
    • Interrupted gene with or0439 
  83. or0439
    • Interrupted gene with or0435 
  84. or0440-or0441
    • Intergenic region with hits
  85. RNA_18-or0445
    • Intergenic region with hits
  86. or0465-or0466
    • Intergenic region with hits
  87. or0466-or0467
    • Intergenic region with hits
  88. or0468
  89. or0469
  90. or0471-or0472
    • Intergenic region with hits
  91. or0484-or0485
    • Intergenic region with hits
  92. or0486-or0487
    • Intergenic region with hits
  93. or0487-or0488
    • Intergenic region with hits
  94. or0490
    • Overlap with or0491(43)
  95. or0491
    • Overlap with or0490(43)
  96. or0499
    • Overlap with or0500(37)
  97. or0500
    • Overlap with or0499(37)
  98. or0504-or0505
    • Intergenic region with hits
  99. or0514-or0515
    • Intergenic region with hits
  100. or0520-or0521
    • Intergenic region with hits
  101. or0521
    • Overlap with or0522(34)
  102. or0522
    • Overlap with or0521(34)
  103. or0524-or0525
    • Intergenic region with hits
  104. or0526-or0527
    • Intergenic region with hits
  105. or0527
    • SHORT
  106. or0536-or0537
    • Intergenic region with hits
  107. or0537-or0538
    • Intergenic region with hits
  108. or0558
    • LONG
  109. or0559
    • Broken gene with or0559  or0560 
    • Interrupted gene with or0560 
    • Overlap with or0560(60)
  110. or0560
    • Broken gene with or0559  or0560 
    • Interrupted gene with or0559 
    • Overlap with or0559(60)
  111. or0566-or0567
    • Intergenic region with hits
  112. or0569
    • Overlap with or0570(31)
  113. or0570
    • Overlap with or0569(31)
  114. or0574-or0575
    • Intergenic region with hits
  115. or0575-or0576
    • Intergenic region with hits
  116. or0582-or0583
    • Intergenic region with hits
  117. or0588-or0589
    • Intergenic region with hits
  118. or0595-or0596
    • Intergenic region with hits
  119. or0596-or0597
    • Intergenic region with hits
  120. or0598-or0599
    • Intergenic region with hits
  121. or0599-or0600
    • Intergenic region with hits
  122. or0601-or0602
    • Intergenic region with hits
  123. or0608-or0609
    • Intergenic region with hits
  124. or0613-or0614
    • Intergenic region with hits
  125. or0626
    • Interrupted gene with or0630 
  126. or0630
    • Interrupted gene with or0626 
  127. or0637-or0638
    • Intergenic region with hits
  128. or0638-or0639
    • Intergenic region with hits
  129. or0646
    • LONG
  130. or0654-or0655
    • Intergenic region with hits
  131. or0655-or0656
    • Intergenic region with hits
  132. or0665-or0666
    • Intergenic region with hits
  133. or0667
    • SHORT
  134. or0668-or0669
    • Intergenic region with hits
  135. or0673-or0674
    • Intergenic region with hits
  136. or0709
    • Overlap with or0710(31)
  137. or0710
    • Overlap with or0709(31)
  138. or0715-or0716
    • Intergenic region with hits
  139. or0722-or0724
    • Intergenic region with hits
  140. or0728-or0729
    • Intergenic region with hits
  141. or0729-or0730
    • Intergenic region with hits
  142. or0738-or0739
    • Intergenic region with hits
  143. or0752
    • Overlap with or0753(40)
  144. or0753
    • Overlap with or0752(40)
  145. RNA_21-or0756
    • Intergenic region with hits
  146. or0757-or0758
    • Intergenic region with hits
  147. or0761-RNA_22
    • Intergenic region with hits
  148. or0762-or0763
    • Intergenic region with hits
  149. or0764-or0765
    • Intergenic region with hits
  150. or0776-or0777
    • Intergenic region with hits
  151. or0777
    • SHORT
  152. or0780-or0781
    • Intergenic region with hits
  153. or0793-or0794
    • Intergenic region with hits
  154. or0815-or0816
    • Intergenic region with hits
  155. or0816
    • SHORT
  156. or0828-or0829
    • Intergenic region with hits
  157. or0850-or0851
    • Intergenic region with hits
  158. RNA_29-or0852
    • Intergenic region with hits
  159. or0855-or0856
    • Intergenic region with hits
  160. or0859-or0860
    • Intergenic region with hits
  161. or0869-or0870
    • Intergenic region with hits
  162. or0870
    • LONG
  163. or0871
    • SHORT
  164. or0871-or0872
    • Intergenic region with hits
  165. or0873-or0874
    • Intergenic region with hits
  166. or0892-or0893
    • Intergenic region with hits
  167. or0893-or0894
    • Intergenic region with hits
  168. or0906-RNA_55
    • Intergenic region with hits
  169. or0913-or0914
    • Intergenic region with hits
  170. or0914
    • SHORT
  171. or0919-or_CrispR5
    • Intergenic region with hits
  172. or_CrispR5
    • CrispR or_CrispR5 CRISPR + 955169 956002 rpt_unit_range="955169..955199"
  173. or_CrispR6
    • CrispR or_CrispR6 CRISPR + 956039 956400 rpt_unit_range="956039..956069"
  174. or0929-or0930
    • Intergenic region with hits
  175. or0938-or0939
    • Intergenic region with hits
  176. or0939
    • SHORT
  177. or0942-or0943
    • Intergenic region with hits
  178. or0943-or0944
    • Intergenic region with hits
  179. or0948-or0949
    • Intergenic region with hits
  180. or0949-or0950
    • Intergenic region with hits
  181. or0953-or0954
    • Intergenic region with hits
  182. or0961-or0962
    • Intergenic region with hits
  183. or0965-or0966
    • Intergenic region with hits
  184. or0966-or0967
    • Intergenic region with hits
  185. or1001-or1002
    • Intergenic region with hits
  186. or1002-or1003
    • Intergenic region with hits
  187. or1024-or1025
    • Intergenic region with hits
  188. or1055
    • Overlap with or1056(33)
  189. or1056
    • Overlap with or1055(33)
  190. or1070
    • Overlap with or1071(34)
  191. or1071
    • Overlap with or1070(34)
  192. or1106-or1107
    • Intergenic region with hits
  193. or1139-or1140
    • Intergenic region with hits
  194. or1160
    • Interrupted gene with or1167 
  195. or1160-or1161
    • Intergenic region with hits
  196. or1161-or1162
    • Intergenic region with hits
  197. or1166-or1167
    • Intergenic region with hits
  198. or1167
    • Interrupted gene with or1160 
  199. or1171-or1172
    • Intergenic region with hits
  200. or1193-or1194
    • Intergenic region with hits
  201. or1228
    • SHORT
  202. or1336-or1337
    • Intergenic region with hits
  203. or1340-Newfeat9
    • Intergenic region with hits
  204. or1343-or1344
    • Intergenic region with hits
  205. or1344-or1345
    • Intergenic region with hits
  206. or1351-or1352
    • Intergenic region with hits
  207. or1352-or1353
    • Intergenic region with hits
  208. or1358
    • SHORT
  209. or1359-RNA_53
    • Intergenic region with hits
  210. or1381-or1382
    • Intergenic region with hits
  211. or1383-or1385
    • Intergenic region with hits
  212. or1388
    • SHORT
  213. or1397-or1398
    • Intergenic region with hits
  214. or1407
    • SHORT
  215. or1411-or1412
    • Intergenic region with hits
  216. or1419-or1420
    • Intergenic region with hits
  217. RNA_31-or1422
    • Intergenic region with hits
  218. or1422
    • SHORT
  219. or1422-or1423
    • Intergenic region with hits
  220. or1425-or1426
    • Intergenic region with hits
  221. or1436-or1437
    • Intergenic region with hits
  222. or1437-or1438
    • Intergenic region with hits
  223. or1485
  224. or1485-or1486
    • Intergenic region with hits
  225. or1488
    • SHORT
  226. or1490
    • Overlap with or1491(46)
  227. or1491
    • Overlap with or1490(46)
  228. or1491-or1492
    • Intergenic region with hits
  229. or1497-or1498
    • Intergenic region with hits
  230. or1499
    • Overlap with or1500(102)
  231. or1500
    • Overlap with or1499(102)
  232. or1500-or1501
    • Intergenic region with hits
  233. or1517
    • Interrupted gene with or1519 
  234. or1519
    • Interrupted gene with or1517 
  235. or1520
    • Overlap with or1521(39)
  236. or1521
    • SHORT
    • Overlap with or1520(39)
  237. or1534-or1535
    • Intergenic region with hits
  238. or1545
  239. or1555
    • SHORT
  240. or1555-or1556
    • Intergenic region with hits
  241. or1560-or1561
    • Intergenic region with hits
  242. or1566
    • LONG
  243. or1571-or1572
    • Intergenic region with hits
  244. or1585
    • Overlap with or1586(37)
  245. or1586
    • Overlap with or1585(37)
  246. or1593-or1594
    • Intergenic region with hits
  247. or1594-or1595
    • Intergenic region with hits
  248. or1597-or1598
    • Intergenic region with hits
  249. or1598
    • SHORT
  250. or1599
    • SHORT
  251. or1599-or1600
    • Intergenic region with hits
  252. or1602-or1603
    • Intergenic region with hits
  253. or1605
    • SHORT
    • Overlap with or1606(39)
  254. or1606
    • Overlap with or1605(39)
  255. or1610-or1611
    • Intergenic region with hits
  256. or1611
    • Broken gene with or1611  or1612 
    • Overlap with or1612(31)
  257. or1612
    • Broken gene with or1611  or1612 
    • Overlap with or1611(31)
  258. or1615
    • SHORT
  259. or1615-or1616
    • Intergenic region with hits
  260. or1625-or1626
    • Intergenic region with hits
  261. or1626-or1627
    • Intergenic region with hits
  262. or1628
  263. or1629
  264. or1630
  265. or1631
  266. or1632
  267. or1632-or1633
    • Intergenic region with hits
  268. or1646
    • Overlap with or1647(31)
  269. or1647
    • Overlap with or1646(31)
  270. or1648-or1649
    • Intergenic region with hits
  271. or1649-or1650
    • Intergenic region with hits
  272. or1653-or1654
    • Intergenic region with hits
  273. or1673-or1674
    • Intergenic region with hits
  274. RNA_47-or1677
    • Intergenic region with hits
  275. or1678-or1679
    • Intergenic region with hits
  276. or1679
    • SHORT
  277. or1679-or1680
    • Intergenic region with hits
  278. or1681-or1682
    • Intergenic region with hits
  279. or1682
    • SHORT
  280. or1682-or1683
    • Intergenic region with hits
  281. or1685
    • SHORT
  282. or1688-or1689
    • Intergenic region with hits
  283. or1691
    • Overlap with or1692(40)
  284. or1692
    • Overlap with or1691(40)
  285. or1692-or1693
    • Intergenic region with hits
  286. or1698-or1699
    • Intergenic region with hits
  287. or1709-or1710
    • Intergenic region with hits
  288. or1730-or1733
    • Intergenic region with hits
  289. or1735-or1736
    • Intergenic region with hits
  290. or1738-or1739
    • Intergenic region with hits
  291. or1750-or1751
    • Intergenic region with hits
  292. or1762-or1763
    • Intergenic region with hits
  293. or1766-or1767
    • Intergenic region with hits
  294. or1767-or1768
    • Intergenic region with hits
  295. or1768-or1769
    • Intergenic region with hits
  296. or1770
    • Overlap with or1771(34)
  297. or1771
    • Overlap with or1770(34)
  298. or1777-or1778
    • Intergenic region with hits
  299. or1778-or1779
    • Intergenic region with hits
  300. or1780-or1781
    • Intergenic region with hits
  301. or1785-or1786
    • Intergenic region with hits
  302. or1816-or1817
    • Intergenic region with hits
  303. or1818
    • SHORT
  304. or1818-or1819
    • Intergenic region with hits
  305. or1820
    • Overlap with or1821(40)
  306. or1821
    • Overlap with or1820(40)
  307. or1831-or1832
    • Intergenic region with hits
  308. or1836-or1837
    • Intergenic region with hits
  309. or1847-or1848
    • Intergenic region with hits
  310. or1853-or1854
    • Intergenic region with hits
  311. or1856-or1857
    • Intergenic region with hits
  312. or1857
    • SHORT
  313. or1858-or1859
    • Intergenic region with hits
  314. or1859
  315. or1860
  316. or1860-or1861
    • Intergenic region with hits
  317. or1868-or1869
    • Intergenic region with hits
  318. or1872-or1873
    • Intergenic region with hits
  319. or1873-or1874
    • Intergenic region with hits
  320. or1875-or1876
    • Intergenic region with hits
  321. or1880
  322. or1880-or1881
    • Intergenic region with hits
  323. or1881
  324. or1881-or1882
    • Intergenic region with hits
  325. or1882-or1883
    • Intergenic region with hits
  326. or1889-or1890
    • Intergenic region with hits
  327. or1893-or1894
    • Intergenic region with hits
  328. or1894
    • SHORT
  329. or1894-or1895
    • Intergenic region with hits
  330. or1895
    • SHORT
  331. or1896-or1897
    • Intergenic region with hits
  332. or1904
    • SHORT
  333. or1904-or1905
    • Intergenic region with hits
  334. or1905
    • SHORT
  335. or1906
    • SHORT
  336. or1906-or1907
    • Intergenic region with hits
  337. or1917-Newfeat15
    • Intergenic region with hits
  338. or1925-or1926
    • Intergenic region with hits
  339. or1945-or1946
    • Intergenic region with hits
  340. or1946-or1947
    • Intergenic region with hits
  341. or1949
    • LONG
  342. or1968-or1970
    • Intergenic region with hits
  343. or1980-or1981
    • Intergenic region with hits
  344. or1987
  345. or1987-or1988
    • Intergenic region with hits
  346. or1988
  347. or1988-or1989
    • Intergenic region with hits
  348. or1990-or1991
    • Intergenic region with hits
  349. or2003-or2004
    • Intergenic region with hits
  350. or2022-or2023
    • Intergenic region with hits
  351. or2023-or2024
    • Intergenic region with hits
  352. or2038-or2039
    • Intergenic region with hits
  353. or2039-or2040
    • Intergenic region with hits
  354. or2040
  355. or2041
  356. or2043-or2044
    • Intergenic region with hits
  357. or2044
  358. or2045
  359. or2045-or2046
    • Intergenic region with hits
  360. or2052-or2053
    • Intergenic region with hits
  361. or2053-or2054
    • Intergenic region with hits
  362. or2054
    • Interrupted gene with or2061 
  363. or2055
  364. or2055-or2056
    • Intergenic region with hits
  365. or2056
  366. or2057
  367. or2058
  368. or2058-or2059
    • Intergenic region with hits
  369. or2059
  370. or2059-or2060
    • Intergenic region with hits
  371. or2061
    • Interrupted gene with or2054 
  372. or2063
    • SHORT
  373. or2063-or2064
    • Intergenic region with hits
  374. or2091
  375. or2092
  376. or2093-or2094
    • Intergenic region with hits
  377. or2104-or2105
    • Intergenic region with hits
  378. or2122-or2123
    • Intergenic region with hits
  379. or2128
    • LONG
  380. or2130-or2131
    • Intergenic region with hits
  381. or2131-or2132
    • Intergenic region with hits
  382. or2145-or2146
    • Intergenic region with hits
  383. or2160-or2161
    • Intergenic region with hits
  384. or2169-or2170
    • Intergenic region with hits
  385. Newfeat18-Newfeat19
    • Intergenic region with hits
  386. or2189-or2190
    • Intergenic region with hits
  387. Newfeat23-or2209
    • Intergenic region with hits
  388. ffs-RNA_34
    • Intergenic region with hits
  389. or2220
    • SHORT
  390. or2221-or2222
    • Intergenic region with hits
  391. or2222
  392. or2222-or2223
    • Intergenic region with hits
  393. or2223
  394. or2223-or2224
    • Intergenic region with hits
  395. or2226-or2228
    • Intergenic region with hits
  396. or2230-or2231
    • Intergenic region with hits
  397. or2237-or2238
    • Intergenic region with hits
  398. or2238
    • Overlap with or2239(31)
  399. or2239
    • Overlap with or2238(31)
  400. or2245
    • Overlap with or2246(37)
  401. or2246
    • Overlap with or2245(37)
  402. or2250
    • SHORT
  403. or2272-or2273
    • Intergenic region with hits
  404. or2283-or2284
    • Intergenic region with hits
  405. or2295-or2296
    • Intergenic region with hits
  406. or2300-or2301
    • Intergenic region with hits
  407. or2304-or2305
    • Intergenic region with hits
  408. or2309-or2310
    • Intergenic region with hits
Click on an anomaly in the left bar to view the associated alignment.