Desulfovibrio desulfuricans ND132, Contig 54
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3467 predicted CDSs,
36 long genes,
58 short genes,
12 broken genes,
8 interrupted genes,
158 intergenic regions with hits,
272 total anomalies.
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View pseudogenes 		Gene prediction anomalies
Chart?chtt=&chs=400x180&chd=s:aadaaaa9&cht=p3&chl=long-1%%7cshort-1%%7cunique-6%%7cdubious-0%%7cbroken-0%%7cinterrupted-0%%7cambiguous-0%%7cok-92% 		Anomaly distribution
Chart?chtt=&chs=500x180&chd=s:nwec9&cht=p3&chl=long-13%%7cshort-21%%7cbroken-4%%7cinterrupted-2%%7cputative+missed-58%
Defectlist
Alns
  1. or0035-or0037
    • Intergenic region with hits
  2. or0046-or0047
    • Intergenic region with hits
  3. or0051-or0052
    • Intergenic region with hits
  4. or0057
    • Overlap with or0058(58)
  5. or0058
    • Overlap with or0057(58)
  6. or0077
    • SHORT
  7. or0116
    • SHORT
  8. or0141
    • LONG
  9. or0145
    • SHORT
  10. or0148-RNA_3
    • Intergenic region with hits
  11. or0152
    • SHORT
  12. or0152-or0153
    • Intergenic region with hits
  13. or0158-or0159
    • Intergenic region with hits
  14. or0162
    • Overlap with or0163(36)
  15. or0163
    • SHORT
    • Overlap with or0162(36)
  16. or0163-or0164
    • Intergenic region with hits
  17. or0171-or0172
    • Intergenic region with hits
  18. or0180-or0183
    • Intergenic region with hits
  19. or0194
    • SHORT
  20. or0215
    • SHORT
  21. or0224-or0227
    • Intergenic region with hits
  22. or0255
    • LONG
  23. or0280
    • SHORT
  24. or0297-or0298
    • Intergenic region with hits
  25. or0334
    • SHORT
  26. or0348
    • LONG
  27. or0352
    • Overlap with or0353(61)
  28. or0353
    • SHORT
    • Overlap with or0352(61)
  29. or0355-or0356
    • Intergenic region with hits
  30. or0363-or0364
    • Intergenic region with hits
  31. or0367-or0368
    • Intergenic region with hits
  32. RNA_7-or0373
    • Intergenic region with hits
  33. or0394
    • SHORT
  34. or0413
    • LONG
  35. or0460
    • LONG
  36. or0475-or0476
    • Intergenic region with hits
  37. or0490-or0491
    • Intergenic region with hits
  38. or0537
    • LONG gene with <100 nt promoter
  39. or0560
    • LONG
  40. or0561
    • SHORT
  41. or0615-or0616
    • Intergenic region with hits
  42. or0626
    • LONG
  43. or0630
  44. or0630-or0631
    • Intergenic region with hits
  45. or0631
  46. or0634
  47. or0635
  48. or0638-or0639
    • Intergenic region with hits
  49. or0673-or0674
    • Intergenic region with hits
  50. or0677-or0678
    • Intergenic region with hits
  51. or0679
    • SHORT
  52. or0697
    • SHORT
  53. or0709-or0711
    • Intergenic region with hits
  54. or0732-or0733
    • Intergenic region with hits
  55. or0735
    • LONG
  56. or0735-or0736
    • Intergenic region with hits
  57. or0745
    • SHORT
  58. or0751
    • LONG
  59. or0755
    • SHORT
  60. or0755-or0757
    • Intergenic region with hits
  61. or0758-or0761
    • Intergenic region with hits
  62. or0775
    • LONG
  63. or0781
  64. or0781-or0782
    • Intergenic region with hits
  65. or0782
  66. or0793
  67. or0793-or0794
    • Intergenic region with hits
  68. or0794
  69. or0804
    • LONG
  70. or0805
    • LONG
  71. or0805-or0806
    • Intergenic region with hits
  72. or0877-or0878
    • Intergenic region with hits
  73. or0879-or0880
    • Intergenic region with hits
  74. or0880
    • SHORT
  75. or0884-or0885
    • Intergenic region with hits
  76. or0889-or0890
    • Intergenic region with hits
  77. or0897
    • SHORT
  78. or0897-or0898
    • Intergenic region with hits
  79. or0905-or0907
    • Intergenic region with hits
  80. or0907-or0908
    • Intergenic region with hits
  81. or0917-or0918
    • Intergenic region with hits
  82. or0919
    • SHORT
  83. or0919-or0921
    • Intergenic region with hits
  84. or0924
    • Overlap with or0925(40)
  85. or0927-or0928
    • Intergenic region with hits
  86. RNA_12-or0931
    • Intergenic region with hits
  87. or0931
    • SHORT
  88. or0932-or0936
    • Intergenic region with hits
  89. or0978-or0980
    • Intergenic region with hits
  90. or0980-or0981
    • Intergenic region with hits
  91. or1000-or1001
    • Intergenic region with hits
  92. or1015-or1017
    • Intergenic region with hits
  93. or1031-or1032
    • Intergenic region with hits
  94. or1032
    • SHORT
  95. or1041
    • LONG
  96. or1045-or1046
    • Intergenic region with hits
  97. or1046
    • SHORT
  98. or1048-or1049
    • Intergenic region with hits
  99. or1063-or1064
    • Intergenic region with hits
  100. or1064
    • SHORT
  101. or1071
    • SHORT
  102. or1073-or1075
    • Intergenic region with hits
  103. or1086-or1087
    • Intergenic region with hits
  104. or1087-or1088
    • Intergenic region with hits
  105. or1097
  106. or1098
  107. or1099
  108. or1109
    • LONG
  109. or1110-or1111
    • Intergenic region with hits
  110. or1168-or1174
    • Intergenic region with hits
  111. or1189-or1191
    • Intergenic region with hits
  112. or1202
    • Overlap with or1203(72)
  113. or1203
    • Overlap with or1202(72)
  114. or1212
    • SHORT
  115. or1217-or1218
    • Intergenic region with hits
  116. or1219
    • SHORT
  117. or1237
    • SHORT
  118. or1247-or1248
    • Intergenic region with hits
  119. or1253-or1254
    • Intergenic region with hits
  120. or1256
    • SHORT
  121. or1260-or1261
    • Intergenic region with hits
  122. or1261-or1262
    • Intergenic region with hits
  123. or1263
    • SHORT
  124. or1272-or1273
    • Intergenic region with hits
  125. or1298
    • SHORT
  126. or1300
    • LONG gene with <100 nt promoter
  127. or1311
    • LONG
  128. or1313-or1314
    • Intergenic region with hits
  129. or1317
    • SHORT
  130. or1322-or1325
    • Intergenic region with hits
  131. or1325-or1329
    • Intergenic region with hits
  132. or1329-or1330
    • Intergenic region with hits
  133. or1344-or1347
    • Intergenic region with hits
  134. or1351-or1352
    • Intergenic region with hits
  135. or1352
    • SHORT
  136. or1364
    • LONG
  137. or1366-or1369
    • Intergenic region with hits
  138. or1386
    • LONG
  139. or1397-or1398
    • Intergenic region with hits
  140. or1418
    • SHORT
  141. or1420-or1421
    • Intergenic region with hits
  142. or1440-or1441
    • Intergenic region with hits
  143. or1452-or1453
    • Intergenic region with hits
  144. or1462
    • SHORT
  145. or1475-or1478
    • Intergenic region with hits
  146. or1513-or1514
    • Intergenic region with hits
  147. or1515
    • LONG
  148. or1524
    • SHORT
  149. or1535-or1536
    • Intergenic region with hits
  150. or1570-or1575
    • Intergenic region with hits
  151. or1579
    • Overlap with or1578(34)
  152. or1588-or1589
    • Intergenic region with hits
  153. or1591-or1592
    • Intergenic region with hits
  154. or1597-or1598
    • Intergenic region with hits
  155. or1599
    • SHORT
  156. or1599-or1600
    • Intergenic region with hits
  157. or1601-or1602
    • Intergenic region with hits
  158. or1602
    • SHORT
  159. or1605
    • LONG
  160. or1605-or1606
    • Intergenic region with hits
  161. or1628-or1629
    • Intergenic region with hits
  162. or1637
    • LONG
  163. or1639-or1640
    • Intergenic region with hits
  164. or1671-or1672
    • Intergenic region with hits
  165. or1681-or1684
    • Intergenic region with hits
  166. or1691-or1692
    • Intergenic region with hits
  167. or1730-RNA_45
    • Intergenic region with hits
  168. or1734-or1736
    • Intergenic region with hits
  169. or1755-or1756
    • Intergenic region with hits
  170. or1760-RNA_44
    • Intergenic region with hits
  171. or1763-or1764
    • Intergenic region with hits
  172. or1764-or1766
    • Intergenic region with hits
  173. or1796-or1797
    • Intergenic region with hits
  174. or1802-or1803
    • Intergenic region with hits
  175. or1824
    • LONG gene with <100 nt promoter
  176. or1828
    • LONG
  177. or1828-or1830
    • Intergenic region with hits
  178. or1835-or1836
    • Intergenic region with hits
  179. or1848
    • SHORT
  180. or1848-or1853
    • Intergenic region with hits
  181. or1861-or1865
    • Intergenic region with hits
  182. or1865-or1868
    • Intergenic region with hits
  183. or1870
    • SHORT
  184. or1870-or1872
    • Intergenic region with hits
  185. or1873-or1875
    • Intergenic region with hits
  186. or1876-or1879
    • Intergenic region with hits
  187. or1895-or1896
    • Intergenic region with hits
  188. or1920-RNA_43
    • Intergenic region with hits
  189. or1921-or1922
    • Intergenic region with hits
  190. or1923-or1924
    • Intergenic region with hits
  191. or1931
    • SHORT
  192. or1940
    • SHORT
  193. or1944-or1945
    • Intergenic region with hits
  194. or1954-or1956
    • Intergenic region with hits
  195. or1974
    • LONG
  196. or1981-or1982
    • Intergenic region with hits
  197. or1991-or1992
    • Intergenic region with hits
  198. or1992
    • SHORT gene with BLASTx hit
  199. or2018-or2019
    • Intergenic region with hits
  200. or2027
    • Overlap with or2028(31)
  201. or2028
    • Overlap with or2027(31)
  202. or2031
    • Overlap with or2030(61)
  203. or2046
    • Overlap with or2047(93)
  204. or2047
    • Overlap with or2048(61)
  205. or2046-or2048
    • Intergenic region with hits
  206. or2048
    • Overlap with or2047(61)
  207. or2070-or2072
    • Intergenic region with hits
  208. or2073-or2076
    • Intergenic region with hits
  209. or2088
    • SHORT
  210. or2088-or2091
    • Intergenic region with hits
  211. or2101
    • SHORT
  212. or2102
    • Overlap with or2103(117)
  213. or2103
    • Overlap with or2102(117)
  214. or2138
    • LONG
  215. or2150
    • SHORT
  216. or2243
    • LONG
  217. or2277
    • LONG
  218. or2280-or2281
    • Intergenic region with hits
  219. or2281-or2282
    • Intergenic region with hits
  220. or2302-or2303
    • Intergenic region with hits
  221. or2313-or2314
    • Intergenic region with hits
  222. or2370-or2373
    • Intergenic region with hits
  223. or2378
    • Overlap with or2379(49)
  224. or2379
    • Overlap with or2378(49)
  225. or2386-or2387
    • Intergenic region with hits
  226. or2387
    • SHORT
  227. or2408
    • LONG
  228. or2408-or2409
    • Intergenic region with hits
  229. or2427-or2428
    • Intergenic region with hits
  230. or2452-or2453
    • Intergenic region with hits
  231. or2454
    • Overlap with or2455(92)
  232. or2455
    • Overlap with or2454(92)
  233. or2479-or2480
    • Intergenic region with hits
  234. or2490-or2491
    • Intergenic region with hits
  235. or2491
  236. or2511-or2513
    • Intergenic region with hits
  237. or2516
    • Overlap with or2521(2831337)
  238. or2517
    • Overlap with or2522(2832216)
  239. or2518
    • Overlap with or2522(2832830)
  240. or2519
    • Overlap with or2522(2833858)
  241. or2520
    • Overlap with or2522(2834154)
  242. or_CrispR1
    • CrispR or_CrispR1 CRISPR + 2834334 2840806 rpt_unit_range="2834334..2834367"
  243. or_CrispR1-or2523
    • Intergenic region with hits
  244. or2537-or2539
    • Intergenic region with hits
  245. or2545-or2547
    • Intergenic region with hits
  246. or2548
    • SHORT
  247. or2572
    • LONG
  248. or2597
    • SHORT
  249. or2613-or2615
    • Intergenic region with hits
  250. or2629-or2630
    • Intergenic region with hits
  251. or2640
    • Overlap with or2641(31)
  252. or2641
    • Overlap with or2640(31)
  253. or2643
    • LONG
  254. or2643-or2644
    • Intergenic region with hits
  255. or2654-or2655
    • Intergenic region with hits
  256. or2665
    • Overlap with or2666(52)
  257. or2666
    • Overlap with or2665(52)
  258. or2677-or2678
    • Intergenic region with hits
  259. or2687-or2688
    • Intergenic region with hits
  260. or2694
    • Overlap with or2695(170)
  261. or2695
    • Overlap with or2694(170)
  262. or2715
    • LONG
  263. or2753
    • Overlap with or2754(40)
  264. or2754
    • Overlap with or2753(40)
  265. or2776
    • Overlap with or2777(34)
  266. or2777
    • Overlap with or2776(34)
  267. or2777-or2779
    • Intergenic region with hits
  268. or2794-or2795
    • Intergenic region with hits
  269. or2795
    • SHORT
  270. or2818-or2819
    • Intergenic region with hits
  271. or2828
    • LONG
  272. or2857
    • LONG
  273. or2885-or2886
    • Intergenic region with hits
  274. or2888-or2891
    • Intergenic region with hits
  275. or2928
    • SHORT
  276. or2933-or2934
    • Intergenic region with hits
  277. RNA_27-or2936
    • Intergenic region with hits
  278. or2940
    • LONG
  279. or2993-or2994
    • Intergenic region with hits
  280. or2998-or2999
    • Intergenic region with hits
  281. or2999
    • SHORT
  282. or3053-or3056
    • Intergenic region with hits
  283. or3066-or3067
    • Intergenic region with hits
  284. or3108-or3109
    • Intergenic region with hits
  285. or3129-or3130
    • Intergenic region with hits
  286. or3130
    • SHORT
  287. or3151
    • SHORT
  288. or3177-or3178
    • Intergenic region with hits
  289. or3208
    • LONG
  290. or3242-or3243
    • Intergenic region with hits
  291. or3291-or3293
    • Intergenic region with hits
  292. or3294
    • SHORT
  293. or3314-or3315
    • Intergenic region with hits
  294. or3315
    • SHORT
  295. or3331
    • SHORT
  296. or3386-or3387
    • Intergenic region with hits
  297. or3387
    • SHORT
  298. or3387-or3388
    • Intergenic region with hits
  299. or3388
    • SHORT
  300. or3390-or3391
    • Intergenic region with hits
Click on an anomaly in the left bar to view the associated alignment.