Leadbetterella byssophila DSM 17132, Contig 23
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3641 predicted CDSs,
44 long genes,
134 short genes,
84 broken genes,
55 interrupted genes,
168 intergenic regions with hits,
485 total anomalies.
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View pseudogenes 		Gene prediction anomalies
Chart?chtt=&chs=400x180&chd=s:acfabaa9&cht=p3&chl=long-1%%7cshort-3%%7cunique-8%%7cdubious-0%%7cbroken-2%%7cinterrupted-1%%7cambiguous-0%%7cok-85% 		Anomaly distribution
Chart?chtt=&chs=500x180&chd=s:qwet9&cht=p3&chl=long-9%%7cshort-27%%7cbroken-17%%7cinterrupted-11%%7cputative+missed-34%
Defectlist
Alns
  1. or0010
    • Overlap with or0011(40)
  2. or0011
    • Overlap with or0010(40)
  3. or0012
    • SHORT
  4. or0019-or0020
    • Intergenic region with hits
  5. or0020-or0021
    • Intergenic region with hits
  6. or0021
    • SHORT
  7. or0038
    • SHORT
  8. or0038-or0039
    • Intergenic region with hits
  9. or0045
    • SHORT
  10. or0064
    • LONG
  11. or0073-or0074
    • Intergenic region with hits
  12. or0074
    • SHORT
  13. or0077
    • SHORT
  14. or0085
    • SHORT
  15. or0085-or0086
    • Intergenic region with hits
  16. or0086
    • SHORT
  17. or0109
    • SHORT
  18. or0120
    • Overlap with or0121(46)
  19. or0119-or0121
    • Intergenic region with hits
  20. or0121
    • Overlap with or0120(46)
  21. or0122-or0123
    • Intergenic region with hits
  22. or0124-or0125
    • Intergenic region with hits
  23. or0125
    • LONG
  24. or0130
    • Overlap with or0131(58)
  25. or0131
    • Overlap with or0130(58)
  26. or0133
    • Overlap with or0134(34)
  27. or0134
    • Overlap with or0133(34)
  28. or0138-or0140
    • Intergenic region with hits
  29. or0173-or0175
    • Intergenic region with hits
  30. or0180-or0183
    • Intergenic region with hits
  31. or0192-or0194
    • Intergenic region with hits
  32. or0200
    • LONG
  33. or0203
    • LONG
  34. or0208
    • Overlap with or0209(65)
  35. or0209
    • Overlap with or0208(65)
  36. or0213-or0214
    • Intergenic region with hits
  37. or0243
    • LONG
  38. or0248
    • SHORT
  39. RNA_5-or0254
    • Intergenic region with hits
  40. or0254
  41. or0255
  42. or0256-or0257
    • Intergenic region with hits
  43. or0257
    • SHORT
  44. or0260-or0261
    • Intergenic region with hits
  45. or0261-or0263
    • Intergenic region with hits
  46. or0266-or0268
    • Intergenic region with hits
  47. or0277-or0278
    • Intergenic region with hits
  48. or0278
  49. or0279
  50. or0280
  51. or0281
  52. or0282
  53. or0282-or0283
    • Intergenic region with hits
  54. or0283-or0286
    • Intergenic region with hits
  55. or0301-or0302
    • Intergenic region with hits
  56. or0302
    • SHORT
  57. or0307-or0310
    • Intergenic region with hits
  58. or0324-or0326
    • Intergenic region with hits
  59. or0326-or0328
    • Intergenic region with hits
  60. or0328
    • SHORT
  61. or0328-or0329
    • Intergenic region with hits
  62. or0330-or0331
    • Intergenic region with hits
  63. or0338-or0339
    • Intergenic region with hits
  64. or0339
    • SHORT
  65. or0342
    • SHORT
  66. or0342-or0346
    • Intergenic region with hits
  67. or0348
    • SHORT
  68. or0380
    • Overlap with or0381(74)
  69. or0381
    • Overlap with or0380(74)
  70. or0386
    • SHORT
  71. or0386-or0388
    • Intergenic region with hits
  72. or0395
    • SHORT
  73. or0407
    • SHORT
  74. or0412
  75. or0412-or0413
    • Intergenic region with hits
  76. or0413
  77. or0419-or0420
    • Intergenic region with hits
  78. or0421-or0422
    • Intergenic region with hits
  79. or0429
    • SHORT gene with BLASTx hit
  80. or0429-or0431
    • Intergenic region with hits
  81. or0467-or0468
    • Intergenic region with hits
  82. or0468
  83. or0468-or0469
    • Intergenic region with hits
  84. or0469
  85. or0470
  86. or0471
  87. or0484
    • SHORT
  88. or0490
    • Overlap with or0491(49)
  89. or0491
    • Overlap with or0490(49)
  90. or0515-or0516
    • Intergenic region with hits
  91. or0517-or0518
    • Intergenic region with hits
  92. or0518
    • SHORT
  93. or0531
    • SHORT
  94. or0531-or0535
    • Intergenic region with hits
  95. or0537-or0539
    • Intergenic region with hits
  96. or0543
    • SHORT
  97. or0549
    • SHORT
  98. or0557-or0558
    • Intergenic region with hits
  99. or0558
    • SHORT
  100. or0558-or0560
    • Intergenic region with hits
  101. or0579
  102. or0580
  103. or0580-or0582
    • Intergenic region with hits
  104. or0582
    • SHORT
  105. or0582-or0584
    • Intergenic region with hits
  106. or0587-or0589
    • Intergenic region with hits
  107. or0591
    • SHORT
  108. or0607
    • Overlap with or0608(48)
  109. or0608
    • Overlap with or0607(48)
  110. or0611
  111. or0612
  112. or0628
    • LONG gene with <100 nt promoter
  113. or0630
    • SHORT
  114. or0645
    • SHORT
  115. or0658
    • LONG
  116. or0664
    • SHORT
  117. or0684
    • LONG
  118. or0686
  119. or0705
    • SHORT
  120. or0718
    • SHORT
  121. or0726
    • SHORT
  122. or0734-or0735
    • Intergenic region with hits
  123. or0735
    • LONG
  124. or0738
    • SHORT
  125. or0743
    • SHORT
  126. or0748
    • SHORT
  127. or0782-or0783
    • Intergenic region with hits
  128. or0791
    • SHORT
  129. or0793-or0796
    • Intergenic region with hits
  130. or0800
  131. or0800-or0801
    • Intergenic region with hits
  132. or0801
  133. or0801-or0802
    • Intergenic region with hits
  134. or0803
    • SHORT
  135. or0803-or0804
    • Intergenic region with hits
  136. or0805
  137. or0806
  138. or0806-or0807
    • Intergenic region with hits
  139. or0815
  140. or0815-or0816
    • Intergenic region with hits
  141. or0816
  142. or0816-or0818
    • Intergenic region with hits
  143. or0819-or0820
    • Intergenic region with hits
  144. or0822
    • SHORT
  145. or0822-or0824
    • Intergenic region with hits
  146. or0830-or0831
    • Intergenic region with hits
  147. or0831
    • SHORT
  148. or0831-or0832
    • Intergenic region with hits
  149. or0832
  150. or0833
  151. or0836
    • SHORT
  152. or0860-or0862
    • Intergenic region with hits
  153. or0862
    • Interrupted gene with or0867 
  154. or0862-or0864
    • Intergenic region with hits
  155. or0864
    • SHORT
  156. or0865
    • Overlap with or0866(55)
  157. or0866
    • Overlap with or0865(55)
  158. or0864-or0867
    • Intergenic region with hits
  159. or0867
    • Interrupted gene with or0862 
  160. or0908
    • SHORT
  161. or0908-or0910
    • Intergenic region with hits
  162. or0911-or0914
    • Intergenic region with hits
  163. or0914
    • SHORT
  164. or0920-or0922
    • Intergenic region with hits
  165. or0922
    • SHORT
  166. or0928-or0930
    • Intergenic region with hits
  167. or0931
  168. or0932
  169. or0934
  170. or0962-or0964
    • Intergenic region with hits
  171. or0966
  172. or0967
  173. or0970
    • SHORT
    • Overlap with or0971(31)
  174. or0971
    • Overlap with or0970(31)
  175. or0977-or0978
    • Intergenic region with hits
  176. or0980-or0981
    • Intergenic region with hits
  177. or0984
    • SHORT
  178. or0989-or0990
    • Intergenic region with hits
  179. or0990
  180. or0991
  181. or0991-or0992
    • Intergenic region with hits
  182. or0992
  183. or0993
    • SHORT
  184. or0994
    • Overlap with or0995(49)
  185. or0993-or0995
    • Intergenic region with hits
  186. or0995
    • Overlap with or0994(49)
  187. or0997-or0998
    • Intergenic region with hits
  188. or1002
    • SHORT
  189. or1003-or1005
    • Intergenic region with hits
  190. or1015
    • SHORT
  191. or1015-rnpB
    • Intergenic region with hits
  192. or1043
    • LONG
  193. or1047
  194. or1048
  195. or1053
  196. or1053-or1054
    • Intergenic region with hits
  197. or1054
  198. or1055
    • SHORT
  199. or1056
  200. or1057
  201. or1057-or1060
    • Intergenic region with hits
  202. or1061
    • Overlap with or1062(40)
  203. or1062
    • Overlap with or1061(40)
  204. or1060-or1063
    • Intergenic region with hits
  205. or1066
  206. or1067
  207. or1071-or1073
    • Intergenic region with hits
  208. or1077
  209. or1078
  210. or1082
    • Overlap with or1083(39)
  211. or1083
    • Overlap with or1082(39)
  212. or1104
    • SHORT
  213. or1111
  214. or1111-or1112
    • Intergenic region with hits
  215. or1112
  216. or1113
  217. or1116
    • SHORT
  218. or1119-or1120
    • Intergenic region with hits
  219. or1121
    • LONG
  220. or1131
    • SHORT
  221. or1134
    • LONG gene with <100 nt promoter
  222. or1136
    • SHORT
  223. or1156
    • LONG gene with <100 nt promoter
  224. or1162-or1163
    • Intergenic region with hits
  225. or1172
  226. or1180-or1181
    • Intergenic region with hits
  227. or1181
    • SHORT
  228. or1181-or1182
    • Intergenic region with hits
  229. or1182
  230. or1183
  231. or1185
    • Overlap with or1186(31)
  232. or1186
    • Overlap with or1185(31)
  233. or1210
    • LONG
  234. or1224-or1227
    • Intergenic region with hits
  235. or1242
    • SHORT
  236. or1254
    • SHORT
  237. or1277
    • SHORT
  238. or1297
    • SHORT
  239. or1300
    • LONG
  240. or1308
    • SHORT
  241. or1321
    • Overlap with or1322(69)
  242. or1322
    • Overlap with or1321(69)
  243. or1323
    • SHORT
  244. or1329
    • SHORT
  245. or1345
    • SHORT
  246. or1357-or1358
    • Intergenic region with hits
  247. or1358
    • SHORT
  248. or1360
    • Overlap with or1361(37)
  249. RNA_13
    • Overlap with or1360(1611)
  250. or1361
    • Overlap with or1360(37)
  251. or1362
    • Overlap with or1363(42)
  252. or1363
    • Overlap with or1362(42)
  253. or1392-or1393
    • Intergenic region with hits
  254. or1401
  255. or1402
  256. or1402-or1403
    • Intergenic region with hits
  257. or1403
    • SHORT
  258. or1404-or1405
    • Intergenic region with hits
  259. or1405
    • SHORT
  260. or1405-or1407
    • Intergenic region with hits
  261. or1407-or1408
    • Intergenic region with hits
  262. or1408
    • SHORT
  263. or1413
    • Overlap with or1414(48)
  264. or1414
    • Overlap with or1413(48)
  265. or1428
    • LONG
  266. or1447
    • LONG
  267. or1450
    • Overlap with or1451(37)
  268. or1451
    • Overlap with or1450(37)
  269. or1461
    • SHORT
  270. or1466
    • Overlap with or1467(177)
  271. or1467
    • Overlap with or1466(177)
  272. or1473
    • Overlap with or1474(101)
  273. or1474
    • Overlap with or1473(101)
  274. or1498
    • SHORT
  275. or1506
    • SHORT
  276. or1524
    • Interrupted gene with or1530 
  277. or1530
    • Interrupted gene with or1524 
  278. or1534-or1535
    • Intergenic region with hits
  279. or1535
    • SHORT
  280. or1535-or1536
    • Intergenic region with hits
  281. or1541-or1543
    • Intergenic region with hits
  282. or1559
    • LONG
  283. or1567-or1568
    • Intergenic region with hits
  284. or1571
    • Overlap with or1572(49)
  285. or1572-or1578
    • Intergenic region with hits
  286. or1627
    • Overlap with or1628(97)
  287. or1628
    • Overlap with or1627(97)
  288. or1635-or1637
    • Intergenic region with hits
  289. or1648
    • SHORT
  290. or1655
    • LONG
  291. or1664
    • LONG
  292. or1664-or1665
    • Intergenic region with hits
  293. or1677
    • SHORT
  294. or1680-or1681
    • Intergenic region with hits
  295. or1691
    • Overlap with or1692(43)
  296. or1692
    • Overlap with or1691(43)
  297. or1714-or1717
    • Intergenic region with hits
  298. or1752
    • Overlap with or1753(49)
  299. or1753
    • SHORT
    • Overlap with or1752(49)
  300. or1789
    • SHORT
  301. or1793
    • SHORT
  302. or1823-or1824
    • Intergenic region with hits
  303. or1873-or_CrispR1
    • Intergenic region with hits
  304. or_CrispR1
    • CrispR or_CrispR1 CRISPR + 1936734 1937019 rpt_unit_range="1936734..1936783"
  305. or_CrispR2
    • CrispR or_CrispR2 CRISPR + 1937208 1937495 rpt_unit_range="1937208..1937259"
  306. or1875-or_CrispR3
    • Intergenic region with hits
  307. or_CrispR3
    • CrispR or_CrispR3 CRISPR + 1938840 1940149 rpt_unit_range="1938840..1938889"
  308. or1876
    • SHORT
  309. or1893
  310. or1894
  311. or1895
  312. or1895-or1896
    • Intergenic region with hits
  313. or1896
  314. or1904
    • Overlap with or1905(70)
  315. or1905
    • SHORT
    • Overlap with or1904(70)
  316. or1905-or1906
    • Intergenic region with hits
  317. or1908
    • LONG
  318. or1928
    • LONG
  319. or1939
    • Overlap with or1940(58)
  320. or1940
    • LONG
    • Overlap with or1939(58)
  321. or1948
    • SHORT
  322. or1952
    • LONG
  323. or1963-or1964
    • Intergenic region with hits
  324. or1986
  325. or1987
  326. or1987-or1988
    • Intergenic region with hits
  327. RNA_15-or1996
    • Intergenic region with hits
  328. or1999-or2000
    • Intergenic region with hits
  329. or2000
    • Interrupted gene with or2003 
  330. or2000-or2001
    • Intergenic region with hits
  331. or2001-or2002
    • Intergenic region with hits
  332. or2002-or2003
    • Intergenic region with hits
  333. or2003
    • Interrupted gene with or2000 
  334. or2003-or2005
    • Intergenic region with hits
  335. or2005
    • Overlap with or2006(37)
  336. or2006
    • Overlap with or2005(37)
  337. or2038
    • LONG
  338. or2042-or2043
    • Intergenic region with hits
  339. or2044
    • Overlap with or2045(31)
  340. or2045
    • Overlap with or2044(31)
  341. or2069
    • Overlap with or2070(37)
  342. or2070
    • Overlap with or2069(37)
  343. or2082
    • LONG
  344. or2105
    • LONG
  345. or2114
    • LONG
    • Overlap with Newfeat3(167)
  346. Newfeat3
    • Overlap with or2114(167)
  347. or2116
    • Overlap with or2117(49)
  348. or2117
    • LONG gene with <100 nt promoter
    • Overlap with or2116(49)
  349. or2118
    • LONG gene with <100 nt promoter
  350. or2133
    • LONG
  351. or2146
    • LONG
  352. or2160
    • SHORT
  353. or2162
    • SHORT
  354. or2165
    • LONG
  355. or2168
    • SHORT
  356. or2168-or2169
    • Intergenic region with hits
  357. or2183
    • SHORT gene with BLASTx hit
  358. or2183-or2184
    • Intergenic region with hits
  359. or2189
    • Interrupted gene with or2193 
  360. or2193
  361. or2194
  362. or2220-or2221
    • Intergenic region with hits
  363. or2221
    • SHORT
  364. or2229-or2230
    • Intergenic region with hits
  365. or2232-or2233
    • Intergenic region with hits
  366. or2233
  367. or2234
  368. or2239-or2240
    • Intergenic region with hits
  369. or2240
    • SHORT
  370. or2241
    • SHORT
  371. or2241-or2243
    • Intergenic region with hits
  372. or2243
    • SHORT
  373. or2246
    • SHORT
    • Overlap with or2247(49)
  374. or2247
    • Overlap with or2246(49)
  375. or2251-or2254
    • Intergenic region with hits
  376. or2254
    • Overlap with or2255(39)
  377. or2255
    • Overlap with or2254(39)
  378. or2256
    • SHORT
  379. or2257-or2258
    • Intergenic region with hits
  380. or2258
  381. or2258-or2259
    • Intergenic region with hits
  382. or2259
  383. or2259-or2261
    • Intergenic region with hits
  384. or2261
    • SHORT
  385. or2261-or2262
    • Intergenic region with hits
  386. or2262
  387. or2262-or2263
    • Intergenic region with hits
  388. or2263
  389. or2263-or2264
    • Intergenic region with hits
  390. or2264
  391. or2264-or2265
    • Intergenic region with hits
  392. or2265
  393. or2265-or2266
    • Intergenic region with hits
  394. or2270-or2272
    • Intergenic region with hits
  395. or2272-or2273
    • Intergenic region with hits
  396. or2273
    • SHORT
  397. or2280
    • SHORT
  398. or2285
    • SHORT
  399. or2331-or2332
    • Intergenic region with hits
  400. or2333
    • SHORT
  401. or2344
    • SHORT
  402. or2406
    • Overlap with or2407(34)
  403. or2407
    • Overlap with or2406(34)
  404. or2421
    • SHORT
  405. or2422
    • SHORT
  406. or2423
    • Overlap with or2424(49)
  407. or2424
    • SHORT
    • Overlap with or2423(49)
  408. or2426
    • Overlap with or2427(57)
  409. or2427
    • Overlap with or2426(57)
  410. or2429-or2432
    • Intergenic region with hits
  411. or2433-or2437
    • Intergenic region with hits
  412. or2437-or2438
    • Intergenic region with hits
  413. or2438
    • SHORT
  414. or2439-or2449
    • Intergenic region with hits
  415. or2451-or2453
    • Intergenic region with hits
  416. or2455
  417. or2456
  418. or2457
    • Overlap with or2458(46)
  419. or2458
    • Interrupted gene with or2456 
    • Overlap with or2457(46)
  420. or2460
    • Interrupted gene with or2456 
  421. or2463-or2464
    • Intergenic region with hits
  422. or2464-or2467
    • Intergenic region with hits
  423. or2468
    • SHORT
  424. or2473
  425. or2473-or2474
    • Intergenic region with hits
  426. or2474
  427. or2480
    • LONG
  428. or2502-or2503
    • Intergenic region with hits
  429. or2509
    • LONG
  430. or2512
  431. or2513
  432. or2533
  433. or2534
  434. or2534-Newfeat7
    • Intergenic region with hits
  435. or2548
  436. or2548-or2549
    • Intergenic region with hits
  437. or2549
  438. or2575
    • SHORT
  439. or2582
    • LONG
  440. or2596
    • SHORT
  441. or2597-or2598
    • Intergenic region with hits
  442. or2599
    • SHORT
  443. or2620
    • SHORT
  444. or2621
    • SHORT
  445. or2638-or2639
    • Intergenic region with hits
  446. or2639
    • SHORT
  447. or2642
    • Overlap with or2643(61)
  448. or2643
    • Overlap with or2642(61)
  449. or2647-or2648
    • Intergenic region with hits
  450. or2648
    • SHORT
  451. or2667
    • Overlap with or2668(37)
  452. or2668
    • Overlap with or2667(37)
  453. or2697
    • SHORT
  454. or2708-or2709
    • Intergenic region with hits
  455. or2709
    • SHORT
  456. or2711
    • SHORT
  457. or2714
    • LONG
  458. or2757
    • SHORT
  459. or2786
    • Overlap with or2787(55)
  460. or2787
    • LONG
    • Overlap with or2786(55)
  461. Newfeat12-or2842
    • Intergenic region with hits
  462. or2842
    • SHORT
  463. or2842-or2843
    • Intergenic region with hits
  464. or2843
    • SHORT
  465. or2845
    • Overlap with or2846(37)
  466. or2846
    • Overlap with or2845(37)
  467. or2881-or2883
    • Intergenic region with hits
  468. or2887
    • LONG
  469. or2921
    • Overlap with or2922(52)
  470. or2922
    • Overlap with or2921(52)
  471. or2960
    • SHORT
  472. or2960-or2961
    • Intergenic region with hits
  473. or3023
    • SHORT
  474. or3034
    • Overlap with or3035(37)
  475. or3035
    • Overlap with or3034(37)
  476. or3097-or3099
    • Intergenic region with hits
  477. or3136
  478. or3137
  479. or3150-or3151
    • Intergenic region with hits
  480. or3156
    • LONG gene with <100 nt promoter
  481. or3160
    • LONG
  482. or3177
    • SHORT
  483. or3192
    • SHORT
  484. or3209
    • SHORT
  485. or3221
    • SHORT
  486. or3226
    • SHORT
  487. or3241
    • SHORT
  488. or3303-or3306
    • Intergenic region with hits
  489. or3306-or3309
    • Intergenic region with hits
  490. or3313-or3317
    • Intergenic region with hits
  491. or3320
    • Overlap with or3321(58)
  492. or3321
    • Overlap with or3320(58)
  493. or3322
    • Interrupted gene with or3331 
  494. or3322-or3324
    • Intergenic region with hits
  495. or3324
    • Interrupted gene with or3326 
    • Overlap with or3325(31)
  496. or3325
    • Overlap with or3324(31)
  497. or3324-or3326
    • Intergenic region with hits
  498. or3326
    • Interrupted gene with or3324 
    • Overlap with or3327(31)
  499. or3327
    • Overlap with or3326(31)
  500. or3331
    • Interrupted gene with or3322 
  501. or3333
    • Overlap with or3334(98)
  502. or3334
    • Overlap with or3333(98)
  503. or3334-or3335
    • Intergenic region with hits
  504. or3335
  505. or3336
  506. or3337
    • SHORT
  507. or3337-or3338
    • Intergenic region with hits
  508. or3338
    • SHORT
  509. or3338-RNA_25
    • Intergenic region with hits
  510. or3348-or3349
    • Intergenic region with hits
  511. or3349
    • SHORT
  512. or3349-or3350
    • Intergenic region with hits
  513. or3360
    • SHORT
  514. or3374
    • LONG gene with <100 nt promoter
  515. or3383-or3385
    • Intergenic region with hits
  516. or3412
    • Overlap with Newfeat14(2590)
  517. Newfeat14
    • Overlap with or3412(2590)
  518. or3417
    • SHORT
  519. or3435
    • LONG
  520. or3447
    • SHORT
  521. or3448
  522. or3449
  523. or3451
    • LONG
  524. or3451-or3452
    • Intergenic region with hits
  525. or3452
    • Overlap with or3453(34)
  526. or3453
    • Overlap with or3452(34)
  527. RNA_24-or3479
    • Intergenic region with hits
  528. or3483
    • SHORT
  529. or3496
    • SHORT
  530. or3524
    • Overlap with or3525(40)
  531. or3525
    • Overlap with or3524(40)
  532. or3541
    • SHORT
  533. or3557
    • SHORT
  534. or3566-or3568
    • Intergenic region with hits
  535. or3578
    • SHORT
  536. or3584
    • Overlap with or3585(40)
  537. or3585
    • Overlap with or3584(40)
  538. or3604
    • Overlap with or3605(31)
  539. or3605
    • Overlap with or3604(31)
  540. or3638-or3639
    • Intergenic region with hits
Click on an anomaly in the left bar to view the associated alignment.