Thermoanaerobacter sp. X513, Contig 35
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2426 predicted CDSs,
15 long genes,
56 short genes,
30 broken genes,
30 interrupted genes,
210 intergenic regions with hits,
341 total anomalies.
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View pseudogenes 		Gene prediction anomalies
Chart?chtt=&chs=400x180&chd=s:abbaaaa9&cht=p3&chl=long-0%%7cshort-2%%7cunique-2%%7cdubious-0%%7cbroken-1%%7cinterrupted-1%%7cambiguous-0%%7cok-94% 		Anomaly distribution
Chart?chtt=&chs=500x180&chd=s:eqii9&cht=p3&chl=long-4%%7cshort-16%%7cbroken-8%%7cinterrupted-8%%7cputative+missed-61%
Defectlist
Alns
  1. or0008-or0009
    • Intergenic region with hits
  2. or0011-or0012
    • Intergenic region with hits
  3. or0024-or0025
    • Intergenic region with hits
  4. or0025
    • SHORT
  5. or0025-or0026
    • Intergenic region with hits
  6. or0027-or0028
    • Intergenic region with hits
  7. RNA_2-RNA_3
    • Intergenic region with hits
  8. or0030
    • SHORT
  9. RNA_5-ffs
    • Intergenic region with hits
  10. or0038
    • Overlap with or0039(46)
  11. or0042-Newfeat2
    • Intergenic region with hits
  12. or0047
    • SHORT
  13. or0049-or0050
    • Intergenic region with hits
  14. or0050
    • SHORT
  15. or0050-or0051
    • Intergenic region with hits
  16. or0052
    • Overlap with or0053(42)
  17. or0053
    • Overlap with or0052(42)
  18. or0055
  19. or0056
  20. or0070-or0071
    • Intergenic region with hits
  21. or0072-or0073
    • Intergenic region with hits
  22. or0075-or0076
    • Intergenic region with hits
  23. or0084-or0085
    • Intergenic region with hits
  24. or0093-or0094
    • Intergenic region with hits
  25. or0097
  26. or0097-or0098
    • Intergenic region with hits
  27. or0098
  28. or0123-or0124
    • Intergenic region with hits
  29. or0124-or0125
    • Intergenic region with hits
  30. or0127
    • LONG
  31. or0149-or0150
    • Intergenic region with hits
  32. or0158
    • SHORT
  33. or0159-or0160
    • Intergenic region with hits
  34. or0180
  35. or0180-or0181
    • Intergenic region with hits
  36. or0181
  37. or0186
    • SHORT
  38. or0190
    • SHORT
  39. or0190-or0191
    • Intergenic region with hits
  40. or0193-or0194
    • Intergenic region with hits
  41. or0205-or0206
    • Intergenic region with hits
  42. or0206-or0207
    • Intergenic region with hits
  43. or0208-or0209
    • Intergenic region with hits
  44. or0235-or0236
    • Intergenic region with hits
  45. or0240-or0241
    • Intergenic region with hits
  46. or0261-or0262
    • Intergenic region with hits
  47. or0296-or0297
    • Intergenic region with hits
  48. or0302-or0303
    • Intergenic region with hits
  49. or0317-or0318
    • Intergenic region with hits
  50. or0329-or0330
    • Intergenic region with hits
  51. or0334
    • SHORT
  52. or0334-or0335
    • Intergenic region with hits
  53. Newfeat10-or0338
    • Intergenic region with hits
  54. or0363
    • LONG
  55. or0367-or0368
    • Intergenic region with hits
  56. or0369
    • SHORT
  57. or0369-or0370
    • Intergenic region with hits
  58. or0372-or0373
    • Intergenic region with hits
  59. or0378-or0379
    • Intergenic region with hits
  60. or0390-or0391
    • Intergenic region with hits
  61. or0399-or0400
    • Intergenic region with hits
  62. or0402-or0403
    • Intergenic region with hits
  63. or0428-or0429
    • Intergenic region with hits
  64. or0432-or0433
    • Intergenic region with hits
  65. or0449
  66. or0450
  67. or0455-or0456
    • Intergenic region with hits
  68. or0460-or0461
    • Intergenic region with hits
  69. or0471
    • Overlap with or0472(40)
  70. or0472
    • Overlap with or0471(40)
  71. or0472-or0473
    • Intergenic region with hits
  72. or0473-or0474
    • Intergenic region with hits
  73. or0474
    • SHORT
  74. or0475-or0476
    • Intergenic region with hits
  75. or0499
    • LONG
  76. or0506-or0507
    • Intergenic region with hits
  77. or0511-or0512
    • Intergenic region with hits
  78. or0521-or0522
    • Intergenic region with hits
  79. or0526-or0527
    • Intergenic region with hits
  80. or0530
    • Overlap with or0531(147)
  81. or0531
    • Overlap with Newfeat12(149)
  82. Newfeat12
    • Overlap with or0531(149)
  83. or0532-or0533
    • Intergenic region with hits
  84. or0554-or0555
    • Intergenic region with hits
  85. RNA_11-or0563
    • Intergenic region with hits
  86. or0579-or0580
    • Intergenic region with hits
  87. or0590-or0591
    • Intergenic region with hits
  88. or0599-or0600
    • Intergenic region with hits
  89. or0600
    • Overlap with or0601(40)
  90. or0601
    • Broken gene with or0601  or0602 
    • Interrupted gene with or0602 
    • Overlap with or0600(40)
  91. or0601-or0602
    • Intergenic region with hits
  92. or0602
  93. or0606-or0607
    • Intergenic region with hits
  94. or0613-or0614
    • Intergenic region with hits
  95. or0619-or0620
    • Intergenic region with hits
  96. or0633-or0634
    • Intergenic region with hits
  97. or0637-or0638
    • Intergenic region with hits
  98. or0638-or0639
    • Intergenic region with hits
  99. or0641
    • Overlap with or0642(45)
  100. or0642
    • Overlap with or0641(45)
  101. or0645
    • SHORT
  102. or0650-or0651
    • Intergenic region with hits
  103. or0652
    • LONG
  104. or0654
    • Overlap with or0655(54)
  105. or0655
    • SHORT
    • Overlap with or0654(54)
  106. or0656-or0657
    • Intergenic region with hits
  107. or0659-or0660
    • Intergenic region with hits
  108. or0660-or0661
    • Intergenic region with hits
  109. or0668
    • Overlap with or0669(37)
  110. or0669
    • Overlap with or0668(37)
  111. or0682-or0683
    • Intergenic region with hits
  112. or0684-or0685
    • Intergenic region with hits
  113. or0693-or0694
    • Intergenic region with hits
  114. or0699-or0700
    • Intergenic region with hits
  115. or0700-or0701
    • Intergenic region with hits
  116. or0701
    • Broken gene with or0701  or0702 
    • Interrupted gene with or0702 
    • Overlap with or0702(31)
  117. or0702
    • Broken gene with or0701  or0702 
    • Interrupted gene with or0701 
    • Overlap with or0701(31)
  118. or0721-or0722
    • Intergenic region with hits
  119. or0722-or0723
    • Intergenic region with hits
  120. or0752-or0753
    • Intergenic region with hits
  121. or0754-or0755
    • Intergenic region with hits
  122. or0760-or0761
    • Intergenic region with hits
  123. or0761
    • Overlap with or0762(46)
  124. or0762
    • Overlap with or0761(46)
  125. or0764
    • SHORT
  126. or0765
    • LONG
  127. or0766-or0767
    • Intergenic region with hits
  128. or0767
  129. or0808-or0809
    • Intergenic region with hits
  130. or0825-RNA_56
    • Intergenic region with hits
  131. or0827-or0828
    • Intergenic region with hits
  132. or0830-or0831
    • Intergenic region with hits
  133. or0835-or0836
    • Intergenic region with hits
  134. or0840
    • SHORT
  135. or0850
    • LONG
  136. or0855-RNA_24
    • Intergenic region with hits
  137. or0856-or0857
    • Intergenic region with hits
  138. or0867-or0868
    • Intergenic region with hits
  139. or0870-or0871
    • Intergenic region with hits
  140. or0871
    • SHORT
  141. or0874-or0875
    • Intergenic region with hits
  142. or0884-or0885
    • Intergenic region with hits
  143. or0886-or0887
    • Intergenic region with hits
  144. or0897-or0898
    • Intergenic region with hits
  145. or0900
    • LONG
  146. or0909-or0910
    • Intergenic region with hits
  147. or0910
    • SHORT
  148. or0944-or0945
    • Intergenic region with hits
  149. or0946-or0947
    • Intergenic region with hits
  150. or0948-or0949
    • Intergenic region with hits
  151. or0953-or0954
    • Intergenic region with hits
  152. or0960
  153. or0961
  154. or0961-or0962
    • Intergenic region with hits
  155. Newfeat14-or0988
    • Intergenic region with hits
  156. or0995
    • SHORT
  157. or1001-or1002
    • Intergenic region with hits
  158. or1007-or1008
    • Intergenic region with hits
  159. or1015
    • SHORT
  160. or1016-or1017
    • Intergenic region with hits
  161. or1017
    • SHORT
  162. or1018
    • SHORT
  163. or1019
    • LONG
  164. or1019-or1020
    • Intergenic region with hits
  165. or1021
    • SHORT
  166. or1021-or1022
    • Intergenic region with hits
  167. or1022
    • SHORT
  168. or1022-or1023
    • Intergenic region with hits
  169. or1023
    • LONG
  170. or1028-or1029
    • Intergenic region with hits
  171. or1046
    • Interrupted gene with or1050 
  172. or1050
    • Interrupted gene with or1046 
  173. or1052-or1053
    • Intergenic region with hits
  174. or1065-RNA_54
    • Intergenic region with hits
  175. or1072-or1073
    • Intergenic region with hits
  176. or1073
    • SHORT
  177. or1079-or1080
    • Intergenic region with hits
  178. or1082
    • LONG
  179. or1089-or1090
    • Intergenic region with hits
  180. or1090
  181. or1091
  182. or1092
  183. or1097
    • SHORT
  184. or1102-or1103
    • Intergenic region with hits
  185. or1103-or1104
    • Intergenic region with hits
  186. or1104-or1105
    • Intergenic region with hits
  187. or1112-or1113
    • Intergenic region with hits
  188. or1113-Newfeat15
    • Intergenic region with hits
  189. or1120-or1121
    • Intergenic region with hits
  190. or1133-or1134
    • Intergenic region with hits
  191. or1158-or1159
    • Intergenic region with hits
  192. or1228
    • LONG
  193. or1230
    • SHORT
  194. or1235
  195. or1236
  196. or1251-or1252
    • Intergenic region with hits
  197. or1286-or1287
    • Intergenic region with hits
  198. or1291
    • Interrupted gene with or1298 
  199. or1296-or1297
    • Intergenic region with hits
  200. or1297-or1298
    • Intergenic region with hits
  201. or1298
    • Interrupted gene with or1291 
  202. or1318-or1319
    • Intergenic region with hits
  203. or1329
    • LONG
  204. or1351-or1352
    • Intergenic region with hits
  205. or1373-or1374
    • Intergenic region with hits
  206. or1387
    • Overlap with or1388(34)
  207. or1388
    • Overlap with or1387(34)
  208. or1402
    • Overlap with or1403(33)
  209. or1403
    • Overlap with or1402(33)
  210. or1406
    • SHORT
  211. or1417
    • Overlap with Newfeat18(49)
  212. Newfeat18
    • Overlap with or1417(49)
  213. or1430-or1431
    • Intergenic region with hits
  214. or1487-or1488
    • Intergenic region with hits
  215. or1490
    • SHORT
  216. or1491-or1492
    • Intergenic region with hits
  217. or1493-or1494
    • Intergenic region with hits
  218. or1504-or1505
    • Intergenic region with hits
  219. or1507
    • SHORT
  220. or1508-or1509
    • Intergenic region with hits
  221. or1509-or1510
    • Intergenic region with hits
  222. or1511-or1512
    • Intergenic region with hits
  223. or1519-or1520
    • Intergenic region with hits
  224. or1523-or1524
    • Intergenic region with hits
  225. or1524-or1525
    • Intergenic region with hits
  226. or1529-or1530
    • Intergenic region with hits
  227. or1530-or1531
    • Intergenic region with hits
  228. or1556-or1557
    • Intergenic region with hits
  229. or1558
  230. or1558-or1559
    • Intergenic region with hits
  231. or1559
  232. or1561-or1562
    • Intergenic region with hits
  233. or1566-RNA_52
    • Intergenic region with hits
  234. or1569
    • Overlap with or1570(40)
  235. or1570
    • Overlap with or1569(40)
  236. or1582
  237. or1583
  238. or1585-or1586
    • Intergenic region with hits
  239. or1591-or1592
    • Intergenic region with hits
  240. or1594-or1595
    • Intergenic region with hits
  241. or1595-or1596
    • Intergenic region with hits
  242. or1606
    • SHORT
  243. or1625-or1626
    • Intergenic region with hits
  244. or1664
    • Interrupted gene with or1667 
  245. or1665
  246. or1665-or1666
    • Intergenic region with hits
  247. or1666
  248. or1667
    • Interrupted gene with or1664 
  249. or1672-or1673
    • Intergenic region with hits
  250. or1677
    • Overlap with or1678(31)
  251. or1678
    • Overlap with or1677(31)
  252. or1708
    • SHORT
  253. or1711
    • SHORT
  254. or1714-or1715
    • Intergenic region with hits
  255. or1721
  256. or1722
  257. or1723
    • SHORT
  258. or1724
    • SHORT
  259. or1726-or1727
    • Intergenic region with hits
  260. or1732
    • Overlap with or1733(61)
  261. or1733
    • Overlap with or1732(61)
  262. or1734
    • Overlap with or1735(37)
  263. or1735
    • Overlap with or1734(37)
  264. or1738-or1739
    • Intergenic region with hits
  265. or1752-or1753
    • Intergenic region with hits
  266. or1753-or1754
    • Intergenic region with hits
  267. or1754
    • SHORT
  268. or1754-or1755
    • Intergenic region with hits
  269. or1760-or1761
    • Intergenic region with hits
  270. or1768-or1769
    • Intergenic region with hits
  271. or1775-or1776
    • Intergenic region with hits
  272. or1776
    • SHORT
  273. or1777
    • SHORT
  274. or1777-or1778
    • Intergenic region with hits
  275. or1781-or1782
    • Intergenic region with hits
  276. or1788
    • Interrupted gene with or1794 
  277. or1794
    • Interrupted gene with or1788 
  278. or1806-or1807
    • Intergenic region with hits
  279. or1817-or1818
    • Intergenic region with hits
  280. or1819-or1820
    • Intergenic region with hits
  281. or1823
    • SHORT
  282. or1823-or1824
    • Intergenic region with hits
  283. or1831-or1832
    • Intergenic region with hits
  284. or1837-or1838
    • Intergenic region with hits
  285. or1844-or1845
    • Intergenic region with hits
  286. or1845-or1846
    • Intergenic region with hits
  287. or1850
    • Overlap with or1851(31)
  288. or1851
    • Overlap with or1850(31)
  289. or1853-or1854
    • Intergenic region with hits
  290. or1861
    • LONG
  291. or1864-or1865
    • Intergenic region with hits
  292. or1895
    • SHORT
  293. or1907
    • Overlap with or1908(34)
  294. or1908
    • Overlap with or1907(34)
  295. or1908-or1909
    • Intergenic region with hits
  296. or1916-or1917
    • Intergenic region with hits
  297. or1922-or1923
    • Intergenic region with hits
  298. or1927
    • Overlap with or1928(37)
  299. or1928
    • Overlap with or1927(37)
  300. or1939-or1940
    • Intergenic region with hits
  301. or1956-or1957
    • Intergenic region with hits
  302. or1959
    • Overlap with or1960(31)
  303. or1960
    • Overlap with or1959(31)
  304. or1984-RNA_47
    • Intergenic region with hits
  305. Newfeat24-or1987
    • Intergenic region with hits
  306. or2036-or2037
    • Intergenic region with hits
  307. or2051-or2052
    • Intergenic region with hits
  308. or2059-or2060
    • Intergenic region with hits
  309. or2077-or2078
    • Intergenic region with hits
  310. RNA_38-or2100
    • Intergenic region with hits
  311. or2101
    • Overlap with or2102(37)
  312. or2102
    • Overlap with or2101(37)
  313. or2108-or2109
    • Intergenic region with hits
  314. or2110-or2111
    • Intergenic region with hits
  315. or2113
    • SHORT
  316. or2114
    • SHORT
  317. or2114-or2115
    • Intergenic region with hits
  318. or2120-or2122
    • Intergenic region with hits
  319. or2123
    • Overlap with or2124(37)
  320. or2124
    • Overlap with or2123(37)
  321. or2128
    • SHORT
  322. or2129
    • SHORT
  323. or2134-or2135
    • Intergenic region with hits
  324. or2138-or2139
    • Intergenic region with hits
  325. or2139
    • SHORT
  326. or2140-or2141
    • Intergenic region with hits
  327. or2142
    • SHORT
  328. or2143
    • SHORT
  329. or2144
    • SHORT
  330. or2147
    • LONG
  331. or2147-or2148
    • Intergenic region with hits
  332. or2148
    • SHORT
  333. or2150
    • SHORT
  334. or2152-or2153
    • Intergenic region with hits
  335. or_CrispR1
    • CrispR or_CrispR1 CRISPR + 2149249 2149609 rpt_unit_range="2149249..2149278"
  336. or_CrispR1-or2155
    • Intergenic region with hits
  337. or2155
    • Overlap with or2156(31)
  338. or2156
    • Overlap with or2155(31)
  339. or2162
    • SHORT
  340. or2173
    • Overlap with or2174(31)
  341. or2174
    • Overlap with or2173(31)
  342. or2180
    • Overlap with or2181(37)
  343. or2181
    • Overlap with or2180(37)
  344. or2185
    • SHORT
  345. or2192
    • Overlap with or2193(31)
  346. or2193
    • Overlap with or2192(31)
  347. or2198
    • LONG
  348. or2217
    • SHORT
  349. or2229
    • Broken gene with or2229  or2230 
    • Interrupted gene with or2230 
    • Overlap with or2230(58)
  350. or2230
    • Broken gene with or2229  or2230 
    • Interrupted gene with or2229 
    • Overlap with or2229(58)
  351. or2233
    • SHORT
  352. or2258
    • SHORT
  353. or2265-or2266
    • Intergenic region with hits
  354. or2286-or2287
    • Intergenic region with hits
  355. or2298
    • SHORT
  356. or2324
    • Overlap with or2325(37)
  357. or2325
    • Overlap with or2324(37)
  358. or2337
    • SHORT
  359. or2337-or2338
    • Intergenic region with hits
  360. or_CrispR2
    • CrispR or_CrispR2 CRISPR + 2340559 2341192 rpt_unit_range="2340559..2340589"
  361. or_CrispR2-or2345
    • Intergenic region with hits
  362. or_CrispR3
    • CrispR or_CrispR3 CRISPR + 2342890 2346961 rpt_unit_range="2342890..2342920"
  363. or_CrispR3-or2346
    • Intergenic region with hits
  364. or_CrispR4
    • CrispR or_CrispR4 CRISPR + 2348657 2362240 rpt_unit_range="2348657..2348687"
  365. or_CrispR4-or2347
    • Intergenic region with hits
  366. or2358-or2359
    • Intergenic region with hits
  367. or2361-or2362
    • Intergenic region with hits
  368. or2402
    • SHORT
  369. or2405-or2406
    • Intergenic region with hits
  370. or2407-or2408
    • Intergenic region with hits
  371. or2408-or2409
    • Intergenic region with hits
  372. or2420-or2421
    • Intergenic region with hits
  373. or2425-or2426
    • Intergenic region with hits
  374. or2429-or2430
    • Intergenic region with hits
  375. or2434-or2435
    • Intergenic region with hits
Click on an anomaly in the left bar to view the associated alignment.