Dehalogenimonas lykanthroporepellens BL-DC-9, Contig 40
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1713 predicted CDSs,
54 long genes,
61 short genes,
13 broken genes,
18 interrupted genes,
88 intergenic regions with hits,
234 total anomalies.
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View pseudogenes 		Gene prediction anomalies
Chart?chtt=&chs=400x180&chd=s:ccgaaaa9&cht=p3&chl=long-3%%7cshort-3%%7cunique-9%%7cdubious-0%%7cbroken-0%%7cinterrupted-1%%7cambiguous-0%%7cok-84% 		Anomaly distribution
Chart?chtt=&chs=500x180&chd=s:lqil9&cht=p3&chl=long-23%%7cshort-26%%7cbroken-5%%7cinterrupted-7%%7cputative+missed-37%
Defectlist
Alns
  1. or0003
    • LONG
  2. or0013-or0014
    • Intergenic region with hits
  3. or0019
    • SHORT
  4. or0019-RNA_1
    • Intergenic region with hits
  5. or0020-or0021
    • Intergenic region with hits
  6. or0021
    • LONG
  7. or0021-or0022
    • Intergenic region with hits
  8. or0026
    • SHORT
  9. or0026-or0027
    • Intergenic region with hits
  10. or0045
    • Overlap with or0046(46)
  11. or0046
    • Overlap with or0045(46)
  12. or0064
    • SHORT
  13. or0068
    • LONG
  14. or0073
    • SHORT
  15. or0074
    • Interrupted gene with or0082 
  16. or0074-or0075
    • Intergenic region with hits
  17. or0075-or0076
    • Intergenic region with hits
  18. or0082
    • Interrupted gene with or0074 
  19. or0092
    • SHORT
  20. or0125-or0126
    • Intergenic region with hits
  21. or0127
    • LONG
  22. or0134-or0135
    • Intergenic region with hits
  23. or0138
    • SHORT
  24. or0146
    • LONG
  25. or0161
    • SHORT
  26. or0174-or0175
    • Intergenic region with hits
  27. or0175-or0176
    • Intergenic region with hits
  28. or0179
    • LONG
  29. or0180
    • SHORT
  30. or0182
    • Overlap with or0183(138)
  31. or0183
    • Overlap with or0182(138)
  32. or0194
    • LONG
  33. or0200
    • SHORT
  34. or0209
    • SHORT
  35. or0209-or0210
    • Intergenic region with hits
  36. or0211
    • LONG
  37. or0229
    • Overlap with or0230(31)
  38. or0230
    • Overlap with or0229(31)
  39. or0232-or0233
    • Intergenic region with hits
  40. or0240
    • SHORT
  41. or0250-or0251
    • Intergenic region with hits
  42. or0256-or0257
    • Intergenic region with hits
  43. or0258-or0259
    • Intergenic region with hits
  44. or0260
  45. or0262
    • LONG
  46. or0268-or0269
    • Intergenic region with hits
  47. or0273-or0274
    • Intergenic region with hits
  48. or0276
    • SHORT
  49. or0276-or0277
    • Intergenic region with hits
  50. or0277-or0279
    • Intergenic region with hits
  51. or0280
    • LONG
  52. or0285-or0286
    • Intergenic region with hits
  53. or0286
    • SHORT
  54. or0287-or0288
    • Intergenic region with hits
  55. or0292
    • LONG gene with <100 nt promoter
  56. or0293
    • SHORT
  57. or0306-or0307
    • Intergenic region with hits
  58. or0311-or0312
    • Intergenic region with hits
  59. or0316
    • SHORT
  60. or0334
    • Overlap with or0335(98)
  61. or0335
    • Overlap with or0334(98)
  62. or0343
    • LONG
  63. or0357
    • SHORT
  64. or0362
    • SHORT
  65. or0371-RNA_8
    • Intergenic region with hits
  66. or0379
    • LONG
  67. or0385
    • SHORT
  68. or0389
    • SHORT
  69. or0398
    • Interrupted gene with or0400 
  70. or0400
    • Interrupted gene with or0398 
  71. or0402
    • Overlap with or0403(77)
  72. or0403
    • Overlap with or0402(77)
  73. or0424
  74. or0424-or0425
    • Intergenic region with hits
  75. or0426
    • Overlap with or0427(51)
  76. or0427
    • Overlap with or0426(51)
  77. or0430
    • LONG
  78. or0448
    • Overlap with or0449(173)
  79. or0467
    • LONG
  80. or0467-or0468
    • Intergenic region with hits
  81. or0480
    • Interrupted gene with or0482 
  82. or0481
    • LONG
  83. or0482
    • Interrupted gene with or0480 
  84. or0482-or0483
    • Intergenic region with hits
  85. or0489-or0490
    • Intergenic region with hits
  86. or0502
    • SHORT
  87. or0504
    • SHORT
  88. or0522
    • SHORT
  89. or0538
    • SHORT
  90. or0543
    • LONG
  91. or0545
    • SHORT
  92. or0555
    • LONG
  93. or0566-or0568
    • Intergenic region with hits
  94. or0570
    • LONG
  95. or0582
    • LONG
  96. or0591
    • SHORT
  97. or0595
    • SHORT
  98. or0599
    • LONG gene with <100 nt promoter
  99. or0609
    • LONG
  100. or0617
    • Broken gene with or0617  or0618 
    • Interrupted gene with or0618 
    • Overlap with or0618(40)
  101. or0618
    • Broken gene with or0617  or0618 
    • Interrupted gene with or0617 
    • Overlap with or0617(40)
  102. or0620-or0621
    • Intergenic region with hits
  103. or0630
    • SHORT
  104. or0630-RNA_43
    • Intergenic region with hits
  105. RNA_43-or0632
    • Intergenic region with hits
  106. or0634-or0635
    • Intergenic region with hits
  107. or0646-or0647
    • Intergenic region with hits
  108. or0647
    • LONG
  109. or0647-RNA_14
    • Intergenic region with hits
  110. or0649
    • LONG
  111. or0660
    • SHORT
  112. or0660-or0661
    • Intergenic region with hits
  113. or0662
    • LONG
  114. or0663
    • SHORT
  115. or0669-or0670
    • Intergenic region with hits
  116. or0673-or0674
    • Intergenic region with hits
  117. or0677
    • SHORT
  118. or0677-or0678
    • Intergenic region with hits
  119. or0687
    • SHORT
  120. or0690
    • SHORT
  121. or0703-or0704
    • Intergenic region with hits
  122. or0720
  123. or0721
  124. or0747-or0748
    • Intergenic region with hits
  125. or0757-or0759
    • Intergenic region with hits
  126. or0778
    • SHORT
  127. or0780-or0781
    • Intergenic region with hits
  128. or0782-or0783
    • Intergenic region with hits
  129. or0788-or0789
    • Intergenic region with hits
  130. or0789
    • SHORT
  131. or0810
    • SHORT
  132. or0842
    • LONG
  133. or0843
    • SHORT
  134. or0851-or0853
    • Intergenic region with hits
  135. or0880
    • LONG
  136. or0922
    • SHORT
  137. or0923
    • LONG
  138. or0923-or0924
    • Intergenic region with hits
  139. or0924
    • LONG
  140. or0932
    • Overlap with or0933(65)
  141. or0933
    • Overlap with or0932(65)
  142. or0933-or0934
    • Intergenic region with hits
  143. or0934
    • LONG
  144. or0944
    • LONG
  145. or0946-or0947
    • Intergenic region with hits
  146. or0947
    • SHORT
  147. or0947-or0948
    • Intergenic region with hits
  148. or0973
    • SHORT
  149. or1008
    • LONG
    • Overlap with or1009(74)
  150. or1009
    • Overlap with or1008(74)
  151. or1012
    • LONG
  152. or1036
    • Overlap with or1037(64)
  153. or1037
    • Overlap with or1036(64)
  154. or1042
    • SHORT
  155. or1044
    • LONG
  156. or1049
    • SHORT
  157. or1069-or1070
    • Intergenic region with hits
  158. or1079-or1080
    • Intergenic region with hits
  159. or1103
    • Interrupted gene with or1106 
  160. or1104
    • LONG
  161. or1105
    • SHORT
  162. or1106
    • Interrupted gene with or1103 
  163. or1114-or1115
    • Intergenic region with hits
  164. or1129
    • SHORT
  165. or1133
    • LONG
  166. or1135
    • SHORT
  167. or1137
    • SHORT
  168. or1148-or1149
    • Intergenic region with hits
  169. or1150-or1151
    • Intergenic region with hits
  170. or1152
    • LONG
  171. or1153-or1154
    • Intergenic region with hits
  172. or1166
    • SHORT
  173. or1181-or1182
    • Intergenic region with hits
  174. or1182-or1183
    • Intergenic region with hits
  175. or1185
    • LONG
  176. or1185-or1186
    • Intergenic region with hits
  177. or1186
    • SHORT
  178. or1190
    • LONG
  179. or1198
    • LONG gene with <100 nt promoter
  180. or1210
    • SHORT
  181. or1247
    • Overlap with or1248(31)
  182. or1248
    • Overlap with or1247(31)
  183. or1251-or1252
    • Intergenic region with hits
  184. or1257
    • SHORT
  185. or1260
    • LONG
  186. or1279
    • LONG
  187. or1279-or1280
    • Intergenic region with hits
  188. or1292-or1294
    • Intergenic region with hits
  189. or1298
    • SHORT
    • Overlap with RNA_28(1133)
  190. RNA_28
    • Overlap with or1298(1133)
  191. or1300-or1301
    • Intergenic region with hits
  192. or1305-or1307
    • Intergenic region with hits
  193. or1345
    • Overlap with or1346(60)
  194. or1346
    • Overlap with or1345(60)
  195. or1345-or1347
    • Intergenic region with hits
  196. or1347
    • LONG
  197. or1373
    • LONG
  198. or1375
    • SHORT
  199. or1386
    • SHORT
  200. RNA_29-or1390
    • Intergenic region with hits
  201. or1413-or1414
    • Intergenic region with hits
  202. or1421
    • SHORT
  203. or1436-or1437
    • Intergenic region with hits
  204. or1437-or1438
    • Intergenic region with hits
  205. or1442
    • Broken gene with or1442  or1443 
    • Interrupted gene with or1443 
    • Overlap with or1443(33)
  206. or1443
    • Broken gene with or1442  or1443 
    • Interrupted gene with or1442 
    • Overlap with or1442(33)
  207. or1443-or1444
    • Intergenic region with hits
  208. or1457-or1458
    • Intergenic region with hits
  209. or1458-or1459
    • Intergenic region with hits
  210. or1470
    • LONG
  211. or1470-or1471
    • Intergenic region with hits
  212. or1471
    • SHORT
  213. or1473-or1474
    • Intergenic region with hits
  214. or1474-or1476
    • Intergenic region with hits
  215. or1479
    • SHORT
  216. or1479-or1480
    • Intergenic region with hits
  217. or1481
    • SHORT
  218. or1495
  219. or1495-or1496
    • Intergenic region with hits
  220. or1496
  221. or1508
    • LONG
  222. or1509
    • SHORT
  223. or1509-or1510
    • Intergenic region with hits
  224. or1510-or1511
    • Intergenic region with hits
  225. or1511
    • Interrupted gene with or1514 
  226. or1513-or1514
    • Intergenic region with hits
  227. or1514
    • Interrupted gene with or1511 
  228. or1519
    • SHORT
  229. or1520
    • LONG
  230. or1525
  231. or1526
  232. or1540
    • SHORT
  233. or1552
    • LONG
  234. or1575
    • LONG
  235. or1581
    • Overlap with or1582(33)
  236. or1582
    • Overlap with or1581(33)
  237. or1591
    • SHORT
  238. or1605-or1606
    • Intergenic region with hits
  239. or1608
    • LONG
  240. or1610
    • LONG
  241. or1620-or1621
    • Intergenic region with hits
  242. or1625
    • LONG
  243. or1653-or1654
    • Intergenic region with hits
  244. or1660-or1661
    • Intergenic region with hits
  245. or1661
  246. or1668
    • LONG
  247. or1680-or1681
    • Intergenic region with hits
  248. or1682
    • Overlap with or1683(48)
  249. or1683
    • Overlap with or1682(48)
  250. or1696-RNA_33
    • Intergenic region with hits
  251. or1703
    • LONG gene with <100 nt promoter
  252. or1712-or1713
    • Intergenic region with hits
  253. or1713
    • SHORT
Click on an anomaly in the left bar to view the associated alignment.