Sideroxydans lithotrophicus ES-1, Contig 246
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2972 predicted CDSs,
28 long genes,
76 short genes,
14 broken genes,
8 interrupted genes,
82 intergenic regions with hits,
208 total anomalies.
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Gene prediction anomalies
Chart?chtt=&chs=400x180&chd=s:abaaaaa9&cht=p3&chl=long-0%%7cshort-2%%7cunique-0%%7cdubious-0%%7cbroken-0%%7cinterrupted-0%%7cambiguous-0%%7cok-98% 		Anomaly distribution
Chart?chtt=&chs=500x180&chd=s:u4je9&cht=p3&chl=long-13%%7cshort-36%%7cbroken-6%%7cinterrupted-3%%7cputative+missed-39%
Defectlist
Alns
  1. or0010
    • Overlap with or0011(40)
  2. or0011
    • Overlap with or0010(40)
  3. or0021
    • SHORT
  4. or0021-or0022
    • Intergenic region with hits
  5. or0030
    • LONG
  6. or0031-or0032
    • Intergenic region with hits
  7. or0033
    • SHORT
  8. or0033-or0034
    • Intergenic region with hits
  9. or0036
    • SHORT
  10. or0036-or0037
    • Intergenic region with hits
  11. or0051
    • SHORT
  12. or0069-or0070
    • Intergenic region with hits
  13. or0087-or0088
    • Intergenic region with hits
  14. or0112
    • LONG
  15. or0121
    • SHORT
  16. or0144
    • LONG
  17. or0163
    • Overlap with or0164(37)
  18. or0164
    • LONG
    • Overlap with or0163(37)
  19. or0173
    • Overlap with or0174(34)
  20. or0174
    • Overlap with or0173(34)
  21. or0186-RNA_2
    • Intergenic region with hits
  22. or0201
    • Overlap with or0202(48)
  23. or0202
    • LONG
    • Overlap with or0201(48)
  24. or0283
    • SHORT
  25. or0285
    • Interrupted gene with or2346 
  26. or0287
    • SHORT
  27. or0307-or0308
    • Intergenic region with hits
  28. or0315
    • SHORT
  29. or0325
    • SHORT
  30. or0335-or0336
    • Intergenic region with hits
  31. or0339-or0340
    • Intergenic region with hits
  32. or0343
    • LONG
  33. or0344
    • LONG
  34. or0359-or0360
    • Intergenic region with hits
  35. or0362
  36. or0363
  37. or0377-or0378
    • Intergenic region with hits
  38. or0395
    • SHORT
  39. or0405
    • SHORT
  40. or0419
    • SHORT
  41. or0419-or0420
    • Intergenic region with hits
  42. or0420
    • SHORT gene with BLASTx hit
  43. or0425-or0426
    • Intergenic region with hits
  44. or0427
    • LONG
  45. or0477
    • LONG
  46. or0482-or0483
    • Intergenic region with hits
  47. or0483
  48. or0483-or0484
    • Intergenic region with hits
  49. or0484
  50. or0484-or0485
    • Intergenic region with hits
  51. or0504-or0505
    • Intergenic region with hits
  52. or0516
    • SHORT
  53. or0552
    • SHORT
  54. or0557
    • LONG
  55. or0607-or0608
    • Intergenic region with hits
  56. or0608
    • SHORT
  57. or0621
    • SHORT
  58. or0637
    • SHORT
  59. or0639
  60. or0640
  61. or0649
    • SHORT
  62. or0668
    • LONG
  63. or0675-or0676
    • Intergenic region with hits
  64. or0686
    • LONG gene with <100 nt promoter
  65. or0694-or0695
    • Intergenic region with hits
  66. or0695
    • SHORT
  67. or0805
    • LONG
  68. or0810-or0811
    • Intergenic region with hits
  69. or0839
  70. or0840
  71. or0865
  72. or0871-or0872
    • Intergenic region with hits
  73. or0886
    • SHORT
  74. or0891
    • SHORT
  75. or0900-or0901
    • Intergenic region with hits
  76. or0916
    • SHORT
  77. or0961
    • SHORT
  78. or0961-or0962
    • Intergenic region with hits
  79. or0967
    • SHORT
  80. or0994
    • SHORT
  81. or1036
    • SHORT
  82. or1039-or1040
    • Intergenic region with hits
  83. or1040
    • SHORT
  84. or1041
    • Overlap with Newfeat4(1243)
  85. Newfeat4
    • Overlap with or1041(1243)
  86. Newfeat4-or1042
    • Intergenic region with hits
  87. or1060-or1061
    • Intergenic region with hits
  88. or1065
    • SHORT
  89. or1090-or1091
    • Intergenic region with hits
  90. or1098
    • SHORT
  91. or1107-or1108
    • Intergenic region with hits
  92. or1108
    • SHORT
  93. or1132-or1133
    • Intergenic region with hits
  94. or1146
    • SHORT
  95. or1170
    • SHORT
  96. or1170-or1171
    • Intergenic region with hits
  97. or1172-or1173
    • Intergenic region with hits
  98. or1183-or1184
    • Intergenic region with hits
  99. or1198-or1199
    • Intergenic region with hits
  100. or1199-or1200
    • Intergenic region with hits
  101. or1203
    • Overlap with or1204(57)
  102. or1204
    • Overlap with or1203(57)
  103. or1210-or1211
    • Intergenic region with hits
  104. or1222
    • LONG
  105. or1225
    • Overlap with or1226(72)
  106. or1226
    • Overlap with or1225(72)
  107. or1256-or1257
    • Intergenic region with hits
  108. or1261
    • SHORT
  109. or1264-or1265
    • Intergenic region with hits
  110. or1291
    • SHORT
  111. or1348-or1349
    • Intergenic region with hits
  112. or1398
    • SHORT
  113. or1424
    • SHORT
  114. or1469-or1470
    • Intergenic region with hits
  115. or1478
    • LONG
  116. or1500-RNA_43
    • Intergenic region with hits
  117. or1543
    • SHORT
  118. or1543-or1544
    • Intergenic region with hits
  119. or1573
    • LONG
    • Overlap with or1574(57)
  120. or1574
    • Overlap with or1573(57)
  121. or1589-or1590
    • Intergenic region with hits
  122. or1603
    • LONG
  123. or1605-or1606
    • Intergenic region with hits
  124. or1611
    • LONG
  125. or1611-or1612
    • Intergenic region with hits
  126. or1613
    • Overlap with or1614(34)
  127. or1614
    • Overlap with or1613(34)
  128. or1641
    • Overlap with or1642(77)
  129. or1642
    • Overlap with or1641(77)
  130. or1679
    • SHORT
  131. or1708-or1709
    • Intergenic region with hits
  132. or1709
    • SHORT
  133. or1713
    • SHORT
  134. or1713-or1714
    • Intergenic region with hits
  135. or1714
    • LONG
  136. or1715
    • SHORT
  137. or1725
    • SHORT
  138. or1725-or1726
    • Intergenic region with hits
  139. or1739
    • SHORT
  140. or1772-or1773
    • Intergenic region with hits
  141. or1773-or1774
    • Intergenic region with hits
  142. RNA_37-or1788
    • Intergenic region with hits
  143. or1829
    • SHORT
  144. or1829-or1830
    • Intergenic region with hits
  145. or1854
    • SHORT
  146. or1896-or1897
    • Intergenic region with hits
  147. or1907
    • Overlap with or1908(40)
  148. or1908
    • Overlap with or1907(40)
  149. or1909
    • LONG
  150. or1924-or1925
    • Intergenic region with hits
  151. or1926-or1927
    • Intergenic region with hits
  152. or1950-or1951
    • Intergenic region with hits
  153. or1959-or1960
    • Intergenic region with hits
  154. or1960
    • SHORT
  155. or1968-or1969
    • Intergenic region with hits
  156. or1977
    • SHORT
  157. or1989-or1990
    • Intergenic region with hits
  158. or1990-or1991
    • Intergenic region with hits
  159. or2009
    • SHORT
  160. or2040
    • SHORT
  161. or2044
  162. or2045
  163. or2072
    • SHORT
  164. or2073
    • Overlap with or2074(31)
  165. or2074
    • SHORT
    • Overlap with or2073(31)
  166. or2076
    • SHORT
  167. or2083
    • SHORT
  168. or2087
    • SHORT
  169. or2092
    • SHORT
  170. or2168-or2169
    • Intergenic region with hits
  171. or2198
    • Overlap with or2199(72)
  172. or2199
    • Overlap with or2198(72)
  173. or2209
    • SHORT
  174. or2211-or2212
    • Intergenic region with hits
  175. or2217
    • Overlap with or2218(43)
  176. or2218
    • Overlap with or2219(66)
  177. or2219
    • Overlap with or2218(66)
  178. or2231-or2232
    • Intergenic region with hits
  179. or2240
    • SHORT
  180. or2245-or2246
    • Intergenic region with hits
  181. or2274
    • SHORT
  182. or2284
  183. or2318-or2319
    • Intergenic region with hits
  184. or2319-or2320
    • Intergenic region with hits
  185. or2327
    • SHORT
  186. or2331
    • SHORT
  187. or2341
    • SHORT
  188. or2346
    • Interrupted gene with or0285 
  189. or2349
    • SHORT
  190. or2349-or2350
    • Intergenic region with hits
  191. or2352
    • SHORT
  192. or2360
    • SHORT
  193. or2362-or2363
    • Intergenic region with hits
  194. or2363
  195. or2364
  196. or2369
    • Overlap with or2370(33)
  197. or2370
    • Overlap with or2369(33)
  198. or2372
    • SHORT
  199. or2389
    • LONG
  200. or2393
    • LONG
  201. or2401
    • SHORT
  202. or2403-or2404
    • Intergenic region with hits
  203. or2428-or2429
    • Intergenic region with hits
  204. or2450
    • Overlap with or2451(34)
  205. or2451
    • Overlap with or2450(34)
  206. or2532
    • SHORT
  207. or2570
    • Overlap with or2571(58)
  208. or2571
    • Overlap with or2570(58)
  209. or2610
    • SHORT
  210. or2620-or2621
    • Intergenic region with hits
  211. or2627-or2628
    • Intergenic region with hits
  212. or2640
    • SHORT
  213. or2657
    • SHORT
  214. or2665
    • LONG
  215. or2672
    • LONG
  216. or2690-or2691
    • Intergenic region with hits
  217. or2700
    • SHORT
  218. or2749
    • LONG
  219. or2751
    • LONG
  220. or2766-or2767
    • Intergenic region with hits
  221. or2811-or2812
    • Intergenic region with hits
  222. or2881
    • SHORT
  223. or2887-or2888
    • Intergenic region with hits
  224. or2888
    • SHORT
  225. or2892
    • Overlap with or2893(71)
  226. or2893
    • Overlap with or2892(71)
  227. or2898
    • LONG
  228. or2898-or2899
    • Intergenic region with hits
  229. or2926-or2927
    • Intergenic region with hits
  230. or2928
    • LONG
  231. or2937-or2938
    • Intergenic region with hits
  232. or2941
    • SHORT
  233. or2966
    • Overlap with or2967(46)
  234. or2967
    • Overlap with or2966(46)
  235. or2971
    • SHORT
  236. or2971-or2972
    • Intergenic region with hits
  237. or2972-or2972
    • Intergenic region with hits
Click on an anomaly in the left bar to view the associated alignment.