Brachyspira murdochii DSM 12563, Contig 316
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2867 predicted CDSs,
23 long genes,
43 short genes,
42 broken genes,
4 interrupted genes,
92 intergenic regions with hits,
204 total anomalies.
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Gene prediction anomalies
Chart?chtt=&chs=400x180&chd=s:aabaaaa9&cht=p3&chl=long-0%%7cshort-1%%7cunique-3%%7cdubious-0%%7cbroken-1%%7cinterrupted-0%%7cambiguous-0%%7cok-95% 		Anomaly distribution
Chart?chtt=&chs=500x180&chd=s:ocbb9&cht=p3&chl=long-11%%7cshort-21%%7cbroken-20%%7cinterrupted-1%%7cputative+missed-45%
Defectlist
Alns
  1. or0012-or0013
    • Intergenic region with hits
  2. or0035
    • LONG
  3. or0052-or0053
    • Intergenic region with hits
  4. or0056-or0057
    • Intergenic region with hits
  5. or0068
  6. or0069
  7. or0076-or0077
    • Intergenic region with hits
  8. or0083-or0085
    • Intergenic region with hits
  9. or0101-or0102
    • Intergenic region with hits
  10. or0113-or0114
    • Intergenic region with hits
  11. or0118
  12. or0119
  13. or0158-or0159
    • Intergenic region with hits
  14. or0164-or0165
    • Intergenic region with hits
  15. or0188-or0189
    • Intergenic region with hits
  16. or0219
    • LONG
  17. or0221-or0222
    • Intergenic region with hits
  18. or0222
    • SHORT
  19. or0226-or0227
    • Intergenic region with hits
  20. or0253-or0254
    • Intergenic region with hits
  21. or0278-or0280
    • Intergenic region with hits
  22. or0291
    • SHORT
  23. or0333-or0334
    • Intergenic region with hits
  24. or0337
  25. or0338
  26. or0339-or0340
    • Intergenic region with hits
  27. or0374-or0376
    • Intergenic region with hits
  28. or0383
  29. or0384
  30. or0411
    • Overlap with or0412(31)
  31. or0412
    • Overlap with or0411(31)
  32. or0438
    • SHORT
  33. or0446
    • LONG
  34. or0493-or0495
    • Intergenic region with hits
  35. or0500-or0501
    • Intergenic region with hits
  36. or0501
    • LONG
  37. or0507-or0509
    • Intergenic region with hits
  38. or0511-or0512
    • Intergenic region with hits
  39. or0525
    • LONG
  40. or0527-or0529
    • Intergenic region with hits
  41. or0543-or0544
    • Intergenic region with hits
  42. or0546-or0547
    • Intergenic region with hits
  43. or0548
  44. or0549
  45. or0552-or0553
    • Intergenic region with hits
  46. or0580-or0581
    • Intergenic region with hits
  47. or0596
    • LONG
  48. or0602
    • SHORT
  49. or0636
    • Overlap with or0637(33)
  50. or0637
    • Overlap with or0636(33)
  51. or0638-or0639
    • Intergenic region with hits
  52. or0661
    • SHORT
  53. or0665
    • SHORT
  54. or0667
    • SHORT
  55. or0679-or0680
    • Intergenic region with hits
  56. or0692
    • SHORT
  57. or0694-or0695
    • Intergenic region with hits
  58. or0707
  59. or0722
    • SHORT
  60. or0722-or0724
    • Intergenic region with hits
  61. or0745
    • SHORT
  62. or0754-or0755
    • Intergenic region with hits
  63. or0755
    • LONG
  64. or0766
    • SHORT
  65. or0779
    • LONG
  66. or0786
    • SHORT
  67. or0861-or0862
    • Intergenic region with hits
  68. or0862
    • SHORT
  69. or0887
  70. or0888
  71. or0901
    • SHORT
  72. or0903
  73. or0904
  74. or0907
    • Broken gene with or0907  or0908 
    • Overlap with or0908(55)
  75. or0908
    • Broken gene with or0907  or0908 
    • Overlap with or0907(55)
  76. or0910-or0912
    • Intergenic region with hits
  77. or0932
    • SHORT
  78. or0935-or0936
    • Intergenic region with hits
  79. or0936
    • LONG
  80. or0943-or0944
    • Intergenic region with hits
  81. or0979
    • LONG
  82. or1042-or1043
    • Intergenic region with hits
  83. or1051-or1052
    • Intergenic region with hits
  84. or1068
  85. or1069
  86. or1105-or1106
    • Intergenic region with hits
  87. or1114-or1115
    • Intergenic region with hits
  88. or1152-or1153
    • Intergenic region with hits
  89. or1154-or1156
    • Intergenic region with hits
  90. or1158-or1160
    • Intergenic region with hits
  91. or1170-or1171
    • Intergenic region with hits
  92. or1186-or1187
    • Intergenic region with hits
  93. or_CrispR1
    • CrispR or_CrispR1 CRISPR + 1428032 1430411 rpt_unit_range="1428032..1428062"
  94. or_CrispR2
    • CrispR or_CrispR2 CRISPR + 1430584 1431219 rpt_unit_range="1430584..1430615"
  95. or_CrispR2-or1235
    • Intergenic region with hits
  96. or1238
    • LONG
  97. or1255-or1256
    • Intergenic region with hits
  98. RNA_26-or1268
    • Intergenic region with hits
  99. or1276
    • SHORT
  100. or1293
    • SHORT
  101. or1299
    • SHORT
  102. or1313
  103. or1314
  104. or1330
    • Overlap with or1331(55)
  105. or1331
    • Overlap with or1330(55)
  106. or1335
    • Overlap with or1336(34)
  107. or1336
    • Overlap with or1335(34)
  108. or1344-or1346
    • Intergenic region with hits
  109. or1412
    • SHORT
  110. or1422-or1423
    • Intergenic region with hits
  111. or1430
  112. or1430-or1431
    • Intergenic region with hits
  113. or1431
  114. or1454
  115. or1455
  116. or1464
    • SHORT
  117. or1472-or1473
    • Intergenic region with hits
  118. or1496-or1498
    • Intergenic region with hits
  119. or1499
    • SHORT
  120. or1540-or1541
    • Intergenic region with hits
  121. or1544
    • LONG
  122. or1584-or1585
    • Intergenic region with hits
  123. or1592
    • Overlap with or1593(37)
  124. or1593
    • Overlap with or1592(37)
  125. or1595
    • LONG
  126. or1595-or1596
    • Intergenic region with hits
  127. or1597-or1599
    • Intergenic region with hits
  128. or1604
    • Overlap with or1605(36)
  129. or1605
    • Overlap with or1604(36)
  130. or1613
    • SHORT
  131. or1630-or1633
    • Intergenic region with hits
  132. or1671-or1672
    • Intergenic region with hits
  133. or1672
    • SHORT
  134. or1680
    • SHORT
  135. or1686
    • SHORT
  136. or1713
    • SHORT
  137. or1717
    • Overlap with or1718(55)
  138. or1718
    • Overlap with or1717(55)
  139. or1725
    • Overlap with or1726(34)
  140. or1726
    • Overlap with or1725(34)
  141. or1728
    • SHORT
  142. or1759-or1760
    • Intergenic region with hits
  143. or1771
  144. or1772
  145. or1800-or1801
    • Intergenic region with hits
  146. or1869
    • LONG
  147. or1880-or1881
    • Intergenic region with hits
  148. or1883
    • LONG
  149. or1884-or1885
    • Intergenic region with hits
  150. or1887
    • LONG
  151. or1897
    • LONG
  152. or1899
    • SHORT
  153. or1899-or1900
    • Intergenic region with hits
  154. or1900
    • SHORT gene with BLASTx hit
  155. or1902
    • SHORT
  156. or1902-or1904
    • Intergenic region with hits
  157. or1904
  158. or1905
  159. or1908
    • SHORT
  160. or1919-or1920
    • Intergenic region with hits
  161. or1930-Newfeat5
    • Intergenic region with hits
  162. or1944
  163. or1945
  164. or1972-or1973
    • Intergenic region with hits
  165. or1977
    • LONG
  166. or2008-or2009
    • Intergenic region with hits
  167. or2051
    • SHORT
  168. or2051-or2052
    • Intergenic region with hits
  169. or2055
  170. or2056
  171. or2060
    • LONG
  172. or2063
    • SHORT
  173. or2115-or2116
    • Intergenic region with hits
  174. or2127-or2129
    • Intergenic region with hits
  175. or2152-or2153
    • Intergenic region with hits
  176. or2153
    • SHORT
  177. or2156
    • SHORT
  178. or2158
    • LONG
  179. or2173
  180. or2174
  181. or2180-or2181
    • Intergenic region with hits
  182. or2182-or2184
    • Intergenic region with hits
  183. or2235-or2236
    • Intergenic region with hits
  184. or2237-or2238
    • Intergenic region with hits
  185. or2243-or2245
    • Intergenic region with hits
  186. or2267
    • SHORT
  187. or2297
    • Overlap with or2298(55)
  188. or2298
    • Overlap with or2297(55)
  189. or2302
    • Overlap with or2303(34)
  190. or2303
    • Overlap with or2302(34)
  191. or2320
    • LONG
  192. or2331-or2334
    • Intergenic region with hits
  193. or2336-or2337
    • Intergenic region with hits
  194. or2349-or2351
    • Intergenic region with hits
  195. or2352
    • SHORT
  196. or2367-or2369
    • Intergenic region with hits
  197. or2395
  198. or2396
  199. or2402-or2404
    • Intergenic region with hits
  200. or2406
    • SHORT
  201. or2407-RNA_18
    • Intergenic region with hits
  202. or2419
    • SHORT
  203. or2422
  204. or2431
    • Overlap with or2432(54)
  205. or2432
    • Overlap with or2431(54)
  206. or2435-or2436
    • Intergenic region with hits
  207. or2459
    • Overlap with or2460(43)
  208. or2460
    • Overlap with or2459(43)
  209. or2462-or2463
    • Intergenic region with hits
  210. or2467
    • Overlap with or2468(31)
  211. or2468
    • Overlap with or2467(31)
  212. or2478-or2480
    • Intergenic region with hits
  213. or2508
  214. or2509
  215. or2555
    • SHORT
  216. or2564
    • Overlap with or2565(48)
  217. or2565
    • Overlap with or2564(48)
  218. or2577-or2578
    • Intergenic region with hits
  219. or2578
    • Overlap with or2579(36)
  220. or2579
    • Overlap with or2578(36)
  221. or2646
    • SHORT
  222. or2652
    • LONG
  223. or2661
    • SHORT
  224. or2673-or2675
    • Intergenic region with hits
  225. or2684
    • SHORT
  226. or2689
    • Broken gene with or2689  or2690 
    • Overlap with or2690(49)
  227. or2690
    • Broken gene with or2689  or2690 
    • Overlap with or2689(49)
  228. or2691-or2692
    • Intergenic region with hits
  229. or2728-or2729
    • Intergenic region with hits
  230. or2745
    • Interrupted gene with or2395 
  231. or2792-or2793
    • Intergenic region with hits
  232. or2812
    • LONG
  233. or2845-or2847
    • Intergenic region with hits
Click on an anomaly in the left bar to view the associated alignment.