Halothiobacillus neapolitanus c2, Contig 14
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2433 predicted CDSs,
81 long genes,
66 short genes,
21 broken genes,
0 interrupted genes,
73 intergenic regions with hits,
241 total anomalies.
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Gene prediction anomalies
Chart?chtt=&chs=400x180&chd=s:bbbaaaa9&cht=p3&chl=long-3%%7cshort-2%%7cunique-2%%7cdubious-0%%7cbroken-0%%7cinterrupted-0%%7cambiguous-0%%7cok-93% 		Anomaly distribution
Chart?chtt=&chs=500x180&chd=s:9xoa3&cht=p3&chl=long-33%%7cshort-27%%7cbroken-8%%7cinterrupted-0%%7cputative+missed-30%
Defectlist
Alns
  1. or0004
    • LONG
  2. or0009
    • LONG
  3. or0010
    • LONG gene with <100 nt promoter
  4. or0019
    • LONG
  5. or0027
    • LONG
  6. or0060
    • Overlap with or0061(182)
  7. or0061
    • Overlap with or0060(182)
  8. or0076-or0077
    • Intergenic region with hits
  9. or0080
    • SHORT
  10. or0093
    • LONG
  11. or0096-or0097
    • Intergenic region with hits
  12. or0097
    • SHORT
  13. or0097-or0098
    • Intergenic region with hits
  14. or0098
    • SHORT
  15. or0101-or0102
    • Intergenic region with hits
  16. or0132
    • LONG
  17. or0132-or0133
    • Intergenic region with hits
  18. or0164-or0165
    • Intergenic region with hits
  19. or0165
    • SHORT
  20. or0175
    • LONG
  21. or0195
    • Overlap with or0196(46)
  22. or0196
    • Overlap with or0195(46)
  23. or0200
    • Overlap with or0201(46)
  24. or0201
    • Overlap with or0200(46)
  25. or0214
    • LONG
  26. or0220-or0221
    • Intergenic region with hits
  27. or0221
    • LONG
  28. or0232
    • LONG
  29. or0242
    • SHORT
  30. or0254
    • Overlap with or0255(72)
  31. or0255
    • Overlap with or0254(72)
  32. or0284
    • LONG gene with <100 nt promoter
  33. or0291-or0292
    • Intergenic region with hits
  34. or0294
    • LONG
  35. or0294-or0295
    • Intergenic region with hits
  36. or0301
    • Overlap with or0300(52)
  37. or0365
    • SHORT
  38. or0368-or0369
    • Intergenic region with hits
  39. or0369
    • SHORT
  40. or0374-or0375
    • Intergenic region with hits
  41. or0375
    • SHORT
  42. or0376-or0377
    • Intergenic region with hits
  43. or0377-or0378
    • Intergenic region with hits
  44. or0378-or0379
    • Intergenic region with hits
  45. or0380
    • LONG
  46. or0380-or0381
    • Intergenic region with hits
  47. or0391
    • Overlap with or0392(146)
  48. or0392
    • Overlap with or0391(146)
  49. or0394
    • LONG
  50. or0400-or0401
    • Intergenic region with hits
  51. or0403
    • SHORT
  52. or0426
    • LONG
  53. or0441
    • SHORT
  54. or0458
    • Overlap with or0459(131)
  55. or0459
    • Overlap with or0458(131)
  56. or0461
  57. or0462
  58. or0462-RNA_42
    • Intergenic region with hits
  59. or0470
    • SHORT
  60. or0483-or0485
    • Intergenic region with hits
  61. or0485
    • LONG gene with <100 nt promoter
  62. or0485-or0486
    • Intergenic region with hits
  63. or0486
    • LONG
  64. or0486-or0487
    • Intergenic region with hits
  65. or0498
    • LONG
  66. or0515
  67. or0515-or0516
    • Intergenic region with hits
  68. or0526
    • SHORT
  69. or0541
    • Overlap with Newfeat3(109)
  70. Newfeat3
    • Overlap with or0541(109)
  71. or0545
    • Overlap with Newfeat5(120)
  72. Newfeat5
    • Overlap with or0545(120)
  73. or0570
    • SHORT
  74. or0581
    • SHORT
  75. or0586
    • SHORT
  76. or0590-or0591
    • Intergenic region with hits
  77. or0602
    • LONG gene with <100 nt promoter
  78. or0606
    • LONG
  79. or0638
    • Overlap with or0639(52)
  80. or0639
    • Overlap with or0638(52)
  81. or0658-or0659
    • Intergenic region with hits
  82. or0664
    • LONG
    • Overlap with or0665(31)
  83. or0665
    • Overlap with or0664(31)
  84. or0669-or0670
    • Intergenic region with hits
  85. or0670
    • SHORT
  86. or0672
  87. or0672-or0673
    • Intergenic region with hits
  88. or0673
  89. or0682
    • LONG
  90. or0703
    • SHORT
  91. or0704
    • Overlap with Newfeat6(192)
  92. or0703-Newfeat6
    • Intergenic region with hits
  93. Newfeat6
    • Overlap with or0704(192)
  94. or0709
  95. or0710
  96. or0711
    • LONG
  97. or0721
  98. or0722
  99. or0724
    • SHORT
  100. or0735
    • SHORT
  101. or0777
    • Overlap with
  102. ffs
    • Overlap with or0777(155)
  103. or0805
    • LONG
  104. or0808
    • LONG
  105. or0824
    • LONG gene with <100 nt promoter
  106. or0826-or_CrispR1
    • Intergenic region with hits
  107. or_CrispR1
    • CrispR or_CrispR1 CRISPR + 888569 890746 rpt_unit_range="888569..888606"
  108. or0827
    • Overlap with or0828(52)
  109. or0838-or0839
    • Intergenic region with hits
  110. or0875
    • Overlap with or0876(31)
  111. or0876
    • Overlap with or0875(31)
  112. or0883-or0884
    • Intergenic region with hits
  113. or0885-or0886
    • Intergenic region with hits
  114. or0886
    • SHORT
  115. or0890
    • LONG
  116. or0895
    • LONG
  117. or0907-or0908
    • Intergenic region with hits
  118. or0920
    • SHORT
  119. or0921
    • Overlap with or0922(40)
  120. or0922
    • Overlap with or0921(40)
  121. or0931-or0932
    • Intergenic region with hits
  122. or0935
    • Overlap with or0936(73)
  123. or0936
    • Overlap with or0935(73)
  124. or0945-or0946
    • Intergenic region with hits
  125. or0946-or0947
    • Intergenic region with hits
  126. or0947-or0949
    • Intergenic region with hits
  127. or0950-or0951
    • Intergenic region with hits
  128. or0956-or0958
    • Intergenic region with hits
  129. or0958
    • SHORT
  130. or0959
    • SHORT
  131. or0961-or0962
    • Intergenic region with hits
  132. or0962
  133. or0963
  134. or0966
    • SHORT
  135. or0973
    • SHORT
    • Overlap with or0974(122)
  136. or0974
    • Overlap with or0973(122)
  137. or0977
    • SHORT
  138. or0983
    • SHORT
  139. or0983-or0984
    • Intergenic region with hits
  140. or1001
    • LONG
  141. or1031-or1033
    • Intergenic region with hits
  142. or1050
    • LONG
  143. or1061
    • LONG
  144. or1096
    • LONG
  145. or1102
    • LONG
  146. or1102-or1103
    • Intergenic region with hits
  147. or1114
    • LONG
  148. or1169
    • LONG
  149. or1193
    • LONG
  150. or1196
    • LONG
  151. or1217-or1218
    • Intergenic region with hits
  152. or1221-or1222
    • Intergenic region with hits
  153. or1242-or1243
    • Intergenic region with hits
  154. or1262
    • SHORT
  155. or1270
    • SHORT
  156. or1290
    • SHORT
  157. or1296
  158. or1297
  159. or1307
    • Overlap with or1308(71)
  160. or1308
    • Overlap with or1307(71)
  161. or1320
    • LONG
    • Overlap with or1321(55)
  162. or1321
    • Overlap with or1320(55)
  163. or1340
    • Overlap with or1341(60)
  164. or1341
    • Overlap with or1340(60)
  165. or1343
    • SHORT
  166. or1362
    • LONG
  167. or1389
    • SHORT
  168. or1403
    • LONG
  169. or1410-or1411
    • Intergenic region with hits
  170. or1416
    • SHORT
  171. or1418
    • LONG
  172. or1433
    • SHORT
  173. or1433-or1434
    • Intergenic region with hits
  174. or1450
  175. or1451
  176. or1457
    • LONG
  177. or1461
    • SHORT
  178. or1461-or1462
    • Intergenic region with hits
  179. or1485
    • LONG
  180. or1506
  181. or1506-or1507
    • Intergenic region with hits
  182. or1507-or1508
    • Intergenic region with hits
  183. or1510-or1511
    • Intergenic region with hits
  184. or1520
    • LONG
  185. or1526
    • LONG
  186. or1529
    • Overlap with or1530(40)
  187. or1530
    • Overlap with or1529(40)
  188. or1540
    • LONG
  189. or1542
    • SHORT
  190. or1543
    • LONG
  191. or1546
    • Overlap with or1547(55)
  192. or1547
    • Overlap with or1546(55)
  193. or1554
    • SHORT
  194. or1587
    • LONG gene with <100 nt promoter
  195. or1600
    • SHORT
  196. or1618-or1619
    • Intergenic region with hits
  197. or1624
    • SHORT
  198. or1625
    • Overlap with or1626(82)
  199. or1626
    • Overlap with or1625(82)
  200. or1630
    • LONG
  201. or1634
    • SHORT
  202. or1635
    • Overlap with or1636(43)
  203. or1636
    • Dubious
    • Overlap with or1635(43)
  204. or1641-or1642
    • Intergenic region with hits
  205. or1643-or1645
    • Intergenic region with hits
  206. or1645-or1646
    • Intergenic region with hits
  207. or1647
    • SHORT
  208. or1659
    • SHORT
  209. or1681-or1683
    • Intergenic region with hits
  210. or1684
    • Overlap with or1685(52)
  211. or1685
    • Overlap with or1684(52)
  212. or1685-or1686
    • Intergenic region with hits
  213. or1686
    • SHORT
  214. or1691
    • LONG
  215. or1699
    • LONG
  216. or1703
    • LONG
  217. or1715
    • Overlap with or1716(31)
  218. or1716
    • Overlap with or1715(31)
  219. or1719
    • Overlap with or1720(37)
  220. or1720
    • Overlap with or1721(71)
  221. or1721
    • Overlap with or1720(71)
  222. or1721-or1722
    • Intergenic region with hits
  223. or1725
    • SHORT
  224. or1735
    • LONG
  225. or1740
    • SHORT
  226. or1740-or1741
    • Intergenic region with hits
  227. or1751
    • SHORT
  228. or1751-or1752
    • Intergenic region with hits
  229. or1752
    • LONG
  230. or1767
    • LONG gene with <100 nt promoter
  231. or1778-or1779
    • Intergenic region with hits
  232. or1816
    • LONG
  233. or1823
    • LONG
  234. or1835
    • SHORT
  235. or1838
    • LONG
  236. or1853
    • SHORT
  237. or1853-or1854
    • Intergenic region with hits
  238. or1866
    • LONG
  239. or1872
    • LONG
  240. or1878
    • LONG
  241. or1883
    • SHORT
  242. or1898
    • LONG
  243. or1910
    • LONG
  244. or1923
    • LONG
  245. or1924-or1926
    • Intergenic region with hits
  246. or1930
    • LONG
  247. or1939
    • LONG
  248. or1942
    • LONG
  249. or1980
    • SHORT
  250. or1980-or1981
    • Intergenic region with hits
  251. or1982
    • SHORT
  252. or1998-or1999
    • Intergenic region with hits
  253. or2014
    • SHORT
  254. or2014-or2015
    • Intergenic region with hits
  255. or2018
    • SHORT
  256. or2018-or2019
    • Intergenic region with hits
  257. or2039
    • LONG
  258. or2040-or2041
    • Intergenic region with hits
  259. or2042-or2043
    • Intergenic region with hits
  260. or2043
    • SHORT
  261. or2062
    • LONG
  262. or2068
    • SHORT
  263. or2072
    • LONG
  264. or2076-or2077
    • Intergenic region with hits
  265. or2094
    • Overlap with or2095(34)
  266. or2095
    • Overlap with or2094(34)
  267. or2108
    • LONG gene with <100 nt promoter
  268. or2113
    • SHORT
  269. or2116
    • SHORT
  270. or2119
  271. or2144
    • LONG
  272. or2150
    • LONG
  273. or2151
    • SHORT
  274. Newfeat9
    • Overlap with or2155(109)
  275. or2155
    • Overlap with Newfeat9(109)
  276. or2170
    • SHORT
  277. or2184
    • Overlap with or2185(40)
  278. or2185
    • Overlap with or2184(40)
  279. or2190
    • LONG
  280. or2196-or2197
    • Intergenic region with hits
  281. or2199
    • LONG
  282. or2203
    • Overlap with or2204(63)
  283. or2204
    • Overlap with or2203(63)
  284. or2211
    • Overlap with or2212(58)
  285. or2212
    • LONG
    • Overlap with or2211(58)
  286. or2233
    • SHORT
  287. or2239
    • SHORT
    • Overlap with or2240(33)
  288. or2240
    • Overlap with or2239(33)
  289. or2243
    • LONG
  290. or2253
    • LONG
  291. or2263
    • SHORT
  292. or2266
    • Overlap with or2267(37)
  293. or2267
    • Overlap with or2266(37)
  294. or2271
    • SHORT
  295. or2278
  296. or2278-or2279
    • Intergenic region with hits
  297. or2279
  298. or2307
  299. or2308
  300. or2308-or2309
    • Intergenic region with hits
  301. or2311
    • Dubious
  302. or2312
    • SHORT
  303. or2313
    • SHORT
  304. or2359
    • LONG
  305. or2360
    • LONG
  306. or2365
    • Overlap with or2366(82)
  307. or2366
    • Overlap with or2365(82)
  308. or2371-or2373
    • Intergenic region with hits
  309. or2377
    • SHORT
Click on an anomaly in the left bar to view the associated alignment.