Geobacter sulfurreducens PCA
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3412 predicted CDSs,
25 long genes,
24 short genes,
21 broken genes,
21 interrupted genes,
31 intergenic regions with hits,
122 total anomalies.
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View pseudogenes 		Gene prediction anomalies
Chart?chtt=&chs=400x180&chd=s:aaaaaaa9&cht=p3&chl=long-0%%7cshort-0%%7cunique-0%%7cdubious-0%%7cbroken-0%%7cinterrupted-0%%7cambiguous-0%%7cok-100% 		Anomaly distribution
Chart?chtt=&chs=500x180&chd=s:wupp9&cht=p3&chl=long-20%%7cshort-19%%7cbroken-17%%7cinterrupted-17%%7cputative+missed-25%
Defectlist
Alns
  1. GSU_00035
    • LONG
  2. GSU_00042-GSU_00043
    • Intergenic region with hits
  3. GSU_00047
  4. GSU_00048
  5. orf_CrispR1
    • CrispR orf_CrispR1 CRISPR 1 74807 77628
  6. GSU_00069
  7. GSU_00070
  8. GSU_00119
    • LONG
  9. GSU_00124
    • SHORT
  10. GSU_00176
    • LONG
  11. GSU_00192
  12. GSU_00193
  13. GSU_00300
  14. GSU_00302
  15. GSU_00376
    • LONG
  16. GSU_00434
    • Overlap with GSU_00435(36)
  17. GSU_00435
    • Overlap with GSU_00434(36)
  18. GSU_00559
  19. GSU_00562
  20. GSU_00564
    • SHORT
  21. GSU_00576
    • LONG
  22. GSU_00654-GSU_00655
    • Intergenic region with hits
  23. GSU_00657
    • Overlap with GSU_00658(620)
  24. GSU_00658
    • Overlap with GSU_00657(620)
  25. GSU_00703
    • LONG gene with <100 nt promoter
  26. GSU_00729
    • LONG
  27. GSU_00750-GSU_00751
    • Intergenic region with hits
  28. GSU_00751
    • LONG
  29. GSU_00765-GSU_00768
    • Intergenic region with hits
  30. GSU_00770-GSU_00773
    • Intergenic region with hits
  31. GSU_00778
    • LONG
  32. GSU_00807
    • SHORT
  33. GSU_00887
    • Overlap with GSU_00888(76)
  34. GSU_00888
    • Overlap with GSU_00887(76)
  35. GSU_00903
    • LONG
  36. GSU_00941
  37. GSU_00943
  38. GSU_00943-GSU_00944
    • Intergenic region with hits
  39. GSU_00944
  40. GSU_00970-GSU_00971
    • Intergenic region with hits
  41. GSU_00985
    • SHORT
  42. GSU_00991-GSU_00992
    • Intergenic region with hits
  43. GSU_01021
    • LONG
  44. GSU_01042-GSU_01043
    • Intergenic region with hits
  45. GSU_01100
    • Overlap with GSU_01101(132)
  46. GSU_01101
    • Overlap with GSU_01100(132)
  47. GSU_01113
    • From AutoQA
  48. GSU_01147-GSU_01148
    • Intergenic region with hits
  49. GSU_01150
    • Overlap with GSU_01151(620)
  50. GSU_01151
    • Overlap with GSU_01150(620)
  51. GSU_01152-GSU_01153
    • Intergenic region with hits
  52. GSU_01186
    • SHORT
  53. GSU_01196
    • LONG
  54. GSU_01198
    • LONG
  55. GSU_01200
    • From AutoQA
  56. GSU_01218
  57. GSU_01219
  58. GSU_01230
    • LONG
  59. GSU_01236
    • From AutoQA
  60. GSU_01239
    • LONG
  61. GSU_01278
    • SHORT
  62. orf_CrispR2
    • CrispR orf_CrispR2 CRISPR 1 1521850 1530543
  63. GSU_01416
    • LONG
  64. GSU_01417-GSU_01418
    • Intergenic region with hits
  65. GSU_01439
    • SHORT
    • Overlap with GSU_01440(55)
  66. GSU_01524
  67. GSU_01559-GSU_01560
    • Intergenic region with hits
  68. GSU_01563
  69. GSU_01590
    • SHORT
  70. GSU_01595
    • Overlap with GSU_01596(33)
  71. GSU_01596
    • Overlap with GSU_01595(33)
  72. GSU_01682-GSU_01683
    • Intergenic region with hits
  73. GSU_01712
    • SHORT
  74. GSU_01755
    • LONG
  75. GSU_01764-GSU_01766
    • Intergenic region with hits
  76. GSU_01787
    • SHORT
  77. GSU_01832
    • SHORT
  78. GSU_01875
  79. GSU_01883
    • From AutoQA
  80. GSU_01883-GSU_01884
    • Intergenic region with hits
  81. GSU_01884-GSU_01885
    • Intergenic region with hits
  82. GSU_01885
    • From AutoQA
  83. GSU_01905
    • SHORT
  84. GSU_01993
    • From AutoQA
  85. GSU_02158
    • From AutoQA
  86. GSU_02172-GSU_02173
    • Intergenic region with hits
  87. GSU_02175-GSU_02176
    • Intergenic region with hits
  88. GSU_02177
    • SHORT
  89. GSU_02208-GSU_02209
    • Intergenic region with hits
  90. GSU_02210
    • SHORT
  91. GSU_02215
  92. GSU_02217
  93. GSU_02256
    • LONG
  94. GSU_02314-GSU_02315
    • Intergenic region with hits
  95. GSU_02319
    • LONG
  96. GSU_02330
    • From AutoQA
  97. GSU_02380
    • SHORT
  98. GSU_02400
    • SHORT
  99. GSU_02423-GSU_02425
    • Intergenic region with hits
  100. GSU_02428-GSU_02429
    • Intergenic region with hits
  101. GSU_02435
  102. GSU_02453
    • Overlap with GSU_02454(39)
  103. GSU_02454
    • Overlap with GSU_02453(39)
  104. GSU_02496
  105. GSU_02497
  106. GSU_02504-GSU_02505
    • Intergenic region with hits
  107. GSU_02506-GSU_02507
    • Intergenic region with hits
  108. GSU_02539
    • Overlap with GSU_02540(31)
  109. GSU_02540
    • Overlap with GSU_02539(31)
  110. GSU_02598
    • From AutoQA
  111. GSU_02600
    • SHORT
  112. GSU_02622-GSU_02623
    • Intergenic region with hits
  113. GSU_02628-GSU_02629
    • Intergenic region with hits
  114. GSU_02630
    • LONG
  115. GSU_02689
    • LONG
  116. GSU_02704
    • From AutoQA
  117. GSU_02730
    • LONG
  118. GSU_02736
    • Overlap with GSU_02737(45)
  119. GSU_02737
    • Overlap with GSU_02736(45)
  120. GSU_02751
    • LONG
  121. GSU_02864-GSU_02866
    • Intergenic region with hits
  122. GSU_02870
    • From AutoQA
  123. GSU_02894
  124. GSU_02895
  125. GSU_02920
  126. GSU_02921
  127. GSU_02922
  128. GSU_02932
    • Overlap with GSU_02933(34)
  129. GSU_02933
    • Overlap with GSU_02932(34)
  130. GSU_02972
    • SHORT
    • Overlap with GSU_02973(45)
  131. GSU_02973
    • Overlap with GSU_02974(55)
  132. GSU_02974
    • Overlap with GSU_02973(55)
  133. GSU_03018
    • From AutoQA
  134. GSU_03062
    • LONG
  135. GSU_03109
  136. GSU_03110
  137. GSU_03119
  138. GSU_03122
  139. GSU_03129
    • LONG
    • Overlap with GSU_03130(61)
  140. GSU_03130
    • Overlap with GSU_03129(61)
  141. GSU_03202
    • SHORT
  142. GSU_03221
    • From AutoQA
  143. GSU_03273-GSU_03274
    • Intergenic region with hits
  144. GSU_03297
    • From AutoQA
  145. GSU_03322
    • From AutoQA
  146. GSU_03370
    • SHORT
  147. GSU_03409
    • Overlap with GSU_03410(37)
  148. GSU_03410
    • Overlap with GSU_03409(37)
  149. GSU_03429-GSU_03431
    • Intergenic region with hits
  150. GSU_03458-GSU_03459
    • Intergenic region with hits
  151. GSU_03478
  152. GSU_03479
  153. GSU_03500
    • SHORT
Click on an anomaly in the left bar to view the associated alignment.