Staphylococcus aureus
PlusToggle this div
2512 predicted CDSs,
1 long genes,
34 short genes,
38 broken genes,
31 interrupted genes,
70 intergenic regions with hits,
174 total anomalies.
Back to Contig listing
Get original annotation
Get QAed annotation
View pseudogenes 		Gene prediction anomalies
Chart?chtt=&chs=400x180&chd=s:aaaaaaa9&cht=p3&chl=long-0%%7cshort-1%%7cunique-0%%7cdubious-0%%7cbroken-1%%7cinterrupted-1%%7cambiguous-0%%7cok-97% 		Anomaly distribution
Chart?chtt=&chs=500x180&chd=s:acgz9&cht=p3&chl=long-0%%7cshort-19%%7cbroken-21%%7cinterrupted-17%%7cputative+missed-40%
Defectlist
Alns
  1. or0009-or0010
    • Intergenic region with hits
  2. or0059
  3. or0060
  4. or0067-or0068
    • Intergenic region with hits
  5. or0084
    • SHORT
  6. or0092
    • SHORT
  7. or0100
    • From AutoQA
  8. or0127
    • SHORT
  9. or0139
    • From AutoQA
  10. or0144
    • From AutoQA
  11. or0170
  12. or0171
  13. or0180-or0181
    • Intergenic region with hits
  14. or0181-or0182
    • Intergenic region with hits
  15. or0235-or0235
    • Intergenic region with hits
  16. or0-or0240
    • Intergenic region with hits
  17. or0-or0328
    • Intergenic region with hits
  18. or0332
  19. or0332-or0333
    • Intergenic region with hits
  20. or0333
  21. or0333-or0334
    • Intergenic region with hits
  22. or0340-or0341
    • Intergenic region with hits
  23. or0341
  24. or0342
  25. or0342-or0343
    • Intergenic region with hits
  26. or0345-or0346
    • Intergenic region with hits
  27. or0346-or0347
    • Intergenic region with hits
  28. or0349
    • From AutoQA
  29. or0349-or0350
    • Intergenic region with hits
  30. or0353-or0354
    • Intergenic region with hits
  31. or0355
    • Overlap with or0356(7)
  32. or0356-or0356
    • Intergenic region with hits
  33. or0392
    • From AutoQA
  34. or0392-or0393
    • Intergenic region with hits
  35. or0400
    • SHORT
  36. or0404
    • From AutoQA
  37. or0406
  38. or0407
  39. or0408
    • SHORT
  40. or0412-or0413
    • Intergenic region with hits
  41. or0435
    • SHORT
  42. or0441-or0442
    • Intergenic region with hits
  43. or0533
    • SHORT
  44. or0571
    • From AutoQA
  45. or0585
    • Overlap with or0586(37)
  46. or0586
    • Overlap with or0585(37)
  47. or0604-or0605
    • Intergenic region with hits
  48. or0609
    • From AutoQA
  49. or0614-or0615
    • Intergenic region with hits
  50. or0637-or0638
    • Intergenic region with hits
  51. or0653-or0654
    • Intergenic region with hits
  52. or0665
    • From AutoQA
  53. or0709
  54. or0710
  55. or0715-or0716
    • Intergenic region with hits
  56. or0717
    • SHORT
  57. or0758
    • From AutoQA
  58. or0784-or0785
    • Intergenic region with hits
  59. or0796-or0797
    • Intergenic region with hits
  60. or0799-or0799
    • Intergenic region with hits
  61. or0801-or0802
    • Intergenic region with hits
  62. or0802-or0803
    • Intergenic region with hits
  63. or0811
    • From AutoQA
  64. or0812
    • SHORT
  65. or0837-or0838
    • Intergenic region with hits
  66. or0838
    • From AutoQA
  67. or0839
  68. or0840-or0841
    • Intergenic region with hits
  69. or0854
    • From AutoQA
  70. or0878-or0879
    • Intergenic region with hits
  71. or0889-or0890
    • Intergenic region with hits
  72. or0946
    • SHORT
  73. or0951
    • Overlap with or0952(22)
  74. or0952
    • Overlap with or0951(22)
  75. or0976
    • SHORT
  76. or0978
  77. or0979
  78. or1007
  79. or1008
  80. or1023-or1024
    • Intergenic region with hits
  81. or1056-or1057
    • Intergenic region with hits
  82. or1106-or1107
    • Intergenic region with hits
  83. or1107-or1108
    • Intergenic region with hits
  84. or1122
    • SHORT
  85. or1132
    • SHORT
  86. or1150-or1151
    • Intergenic region with hits
  87. or1190
    • SHORT
  88. or0-or1272
    • Intergenic region with hits
  89. or1303-or1304
    • Intergenic region with hits
  90. or1327
    • SHORT
  91. or1356
  92. or1357
  93. or1367
    • SHORT
  94. or1371
    • From AutoQA
  95. or1389-or1390
    • Intergenic region with hits
  96. or1420-or1421
    • Intergenic region with hits
  97. or1474
    • From AutoQA
  98. or1475
    • SHORT
  99. or1477
  100. or1478
  101. or1522
    • SHORT
  102. or1535-or1536
    • Intergenic region with hits
  103. or1542
    • SHORT
  104. or1547
    • Overlap with or1548(31)
  105. or1548
    • Overlap with or1547(31)
  106. or1566
    • From AutoQA
  107. or1567-or1568
    • Intergenic region with hits
  108. or1580-or1581
    • Intergenic region with hits
  109. or1617-or1618
    • Intergenic region with hits
  110. or1710-or1711
    • Intergenic region with hits
  111. or1713
    • SHORT
  112. or1738-or1739
    • Intergenic region with hits
  113. or1767-or1768
    • Intergenic region with hits
  114. or1776-or1777
    • Intergenic region with hits
  115. or1792
    • From AutoQA
  116. or1797-or1798
    • Intergenic region with hits
  117. or1811
    • SHORT
  118. or1811-or1812
    • Intergenic region with hits
  119. or1828
  120. or1828-or1829
    • Intergenic region with hits
  121. or1829
  122. or1830
  123. or1830-or1831
    • Intergenic region with hits
  124. or1831
  125. or1832
  126. or1833
  127. or1835
    • Broken gene with or1835  or1836 
    • Interrupted gene with or1836 
    • Overlap with or1836(33)
  128. or1836
    • Broken gene with or1835  or1836 
    • Interrupted gene with or1835 
    • Overlap with or1835(33)
  129. or1854
    • From AutoQA
  130. or1880-or1881
    • Intergenic region with hits
  131. or1882
  132. or1883
  133. or1889
    • Interrupted gene with or1882 
  134. or1894
    • SHORT
    • Overlap with or1895(10)
  135. or1895
    • LONG
    • Overlap with or1894(10)
  136. or1931-or1932
    • Intergenic region with hits
  137. or1996-or1997
    • Intergenic region with hits
  138. or2008
  139. or2008-or2009
    • Intergenic region with hits
  140. or2025-or2026
    • Intergenic region with hits
  141. or2026
    • From AutoQA
  142. or2026-or2028
    • Intergenic region with hits
  143. or2030
  144. or2031
  145. or2032
    • SHORT
  146. or2033
    • SHORT
  147. or2034
    • SHORT
  148. or2035
    • SHORT
  149. or2043-or2044
    • Intergenic region with hits
  150. or2044-or2046
    • Intergenic region with hits
  151. or2051
    • Interrupted gene with or2049 
  152. or2132-or2133
    • Intergenic region with hits
  153. or2147-or2148
    • Intergenic region with hits
  154. or2177-or2178
    • Intergenic region with hits
  155. or2206-or2207
    • Intergenic region with hits
  156. or2240
    • Overlap with or2241(31)
  157. or2241
    • Overlap with or2240(31)
  158. or2253
    • SHORT
  159. or2268
    • From AutoQA
  160. or2293
    • SHORT
  161. or2349
    • From AutoQA
  162. or2356
    • From AutoQA
  163. or2392
    • SHORT
  164. or2393-or2394
    • Intergenic region with hits
  165. or2466
    • SHORT
  166. or2487
    • SHORT
  167. or2533
  168. or2533-or2534
    • Intergenic region with hits
  169. or2534
  170. or2554
    • Overlap with or2555(31)
  171. or2555
    • Overlap with or2554(31)
  172. or2561-or2562
    • Intergenic region with hits
  173. or2564
    • Overlap with or2565(36)
  174. or2575
    • SHORT
  175. or2588
  176. or2589
  177. or2601-or2602
    • Intergenic region with hits
Click on an anomaly in the left bar to view the associated alignment.