Staphylococcus aureus
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2675 predicted CDSs,
3 long genes,
43 short genes,
68 broken genes,
45 interrupted genes,
99 intergenic regions with hits,
258 total anomalies.
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View pseudogenes 		Gene prediction anomalies
Chart?chtt=&chs=400x180&chd=s:aaaabaa9&cht=p3&chl=long-0%%7cshort-1%%7cunique-0%%7cdubious-0%%7cbroken-2%%7cinterrupted-1%%7cambiguous-0%%7cok-96% 		Anomaly distribution
Chart?chtt=&chs=500x180&chd=s:bzpb9&cht=p3&chl=long-1%%7cshort-16%%7cbroken-26%%7cinterrupted-17%%7cputative+missed-38%
Defectlist
Alns
  1. or0017-or0018
    • Intergenic region with hits
  2. or0026-or0027
    • Intergenic region with hits
  3. or0050
    • From AutoQA
  4. or0059-or0060
    • Intergenic region with hits
  5. or0073-or0074
    • Intergenic region with hits
  6. or0-or0135
    • Intergenic region with hits
  7. or0138
    • Broken gene with or0138  or0139 
    • Interrupted gene with or0139 
    • Overlap with or0139(40)
  8. or0139
    • Broken gene with or0138  or0139 
    • Interrupted gene with or0138 
    • Overlap with or0138(40)
  9. or0146
    • SHORT
  10. or0152
    • From AutoQA
  11. or0-or0187
    • Intergenic region with hits
  12. or0312
    • SHORT
  13. or0316
    • SHORT
  14. or0318
    • From AutoQA
  15. or0336
    • Overlap with or0337(31)
  16. or0337
    • Overlap with or0336(31)
  17. or0363
    • SHORT
  18. or0383-or0384
    • Intergenic region with hits
  19. or0-or0405
    • Intergenic region with hits
  20. or0422-or0423
    • Intergenic region with hits
  21. or0466
  22. or0467
  23. or0470-or0471
    • Intergenic region with hits
  24. or0471
    • Interrupted gene with or0466 
  25. or0474
    • SHORT gene with BLASTx hit
  26. or0474-or0475
    • Intergenic region with hits
  27. or0475
    • From AutoQA
  28. or0480
    • SHORT
  29. or0483
    • From AutoQA
  30. or0497
  31. or0498
  32. or0589
    • SHORT
  33. or0606-or0606
    • Intergenic region with hits
  34. or0614
    • SHORT
  35. or0616
  36. or0617
  37. or0642
  38. or0643
  39. or0644-or0645
    • Intergenic region with hits
  40. or0659
    • SHORT
  41. or0669
  42. or0669-or0670
    • Intergenic region with hits
  43. or0670
  44. or0685
    • SHORT
  45. or0685-or0686
    • Intergenic region with hits
  46. or0755-or0755
    • Intergenic region with hits
  47. or0760
    • SHORT
  48. or0-or0766
    • Intergenic region with hits
  49. or0767
  50. or0768
    • SHORT
  51. or0-or0771
    • Intergenic region with hits
  52. or0844
    • Overlap with or0845(82)
  53. or0845
    • Overlap with or0844(82)
  54. or0858
    • From AutoQA
  55. or0-or0873
    • Intergenic region with hits
  56. or0878
    • SHORT
  57. or0880
    • SHORT
  58. or0887
    • SHORT
  59. or0906
    • SHORT
  60. or0916
  61. or0917
  62. or0-or0941
    • Intergenic region with hits
  63. or0956-or0957
    • Intergenic region with hits
  64. or0965-or0966
    • Intergenic region with hits
  65. or1005-or1006
    • Intergenic region with hits
  66. or1013
  67. or1013-or1014
    • Intergenic region with hits
  68. or1014
  69. or1050-or1051
    • Intergenic region with hits
  70. or1053
  71. or1054
  72. or1056-or1057
    • Intergenic region with hits
  73. or1058
  74. or1059
  75. or1060
    • SHORT
  76. or1082-or1083
    • Intergenic region with hits
  77. or1085-or1086
    • Intergenic region with hits
  78. or1087
  79. or1088
    • SHORT
  80. or1095
    • SHORT
  81. or0-or1097
    • Intergenic region with hits
  82. or1108-or1109
    • Intergenic region with hits
  83. or1134
    • From AutoQA
  84. or1154
    • SHORT
  85. or1171
  86. or1172
  87. or1173
  88. or1174
  89. or1174-or1175
    • Intergenic region with hits
  90. or1175
  91. or1196
    • From AutoQA
  92. or1221-or1222
    • Intergenic region with hits
  93. or1228
    • SHORT
    • Overlap with or1229(10)
  94. or1229
    • LONG
    • Overlap with or1228(10)
  95. or1265-or1266
    • Intergenic region with hits
  96. or1291
  97. or1292
  98. or1317
  99. or1318
  100. or1338-or1339
    • Intergenic region with hits
  101. or1342
    • Interrupted gene with or1344 
  102. or1347-or1348
    • Intergenic region with hits
  103. or1367
  104. or1368
  105. or1371-or1372
    • Intergenic region with hits
  106. or1372-or1374
    • Intergenic region with hits
  107. or1377
  108. or1378
  109. or0-or1384
    • Intergenic region with hits
  110. or1402
  111. or1403
  112. or1404-or1405
    • Intergenic region with hits
  113. or1420
    • Overlap with or1421(31)
  114. or1421
    • Overlap with or1420(31)
  115. or1430
    • From AutoQA
  116. or1435-or1435
    • Intergenic region with hits
  117. -
    • Intergenic region with hits
  118. or1460-or1461
    • Intergenic region with hits
  119. or1493-or1494
    • Intergenic region with hits
  120. or1503
    • SHORT
  121. -
    • Intergenic region with hits
  122. or1505
    • From AutoQA
  123. or1505-or1505
    • Intergenic region with hits
  124. or0-or1507
    • Intergenic region with hits
  125. -
    • Intergenic region with hits
  126. -
    • Intergenic region with hits
  127. -
    • Intergenic region with hits
  128. or1538-or1539
    • Intergenic region with hits
  129. or1539
  130. or1539-or1540
    • Intergenic region with hits
  131. or1540
  132. or0-or1549
    • Intergenic region with hits
  133. or1564
    • From AutoQA
  134. or1573
    • SHORT
  135. or1586
    • From AutoQA
  136. or1601
    • From AutoQA
  137. or1604-or1604
    • Intergenic region with hits
  138. or1609
  139. or1610
  140. or1613
    • Overlap with or1614(22)
  141. or1614
    • Overlap with or1613(22)
  142. or1620
  143. or1637-or1638
    • Intergenic region with hits
  144. or1652-or1653
    • Intergenic region with hits
  145. or1669-or1670
    • Intergenic region with hits
  146. or1672
    • From AutoQA
  147. or1678
    • From AutoQA
  148. or1682
    • SHORT
  149. or1690
  150. or1690-or1691
    • Intergenic region with hits
  151. or1691
  152. or1703-or1704
    • Intergenic region with hits
  153. or1749-or1750
    • Intergenic region with hits
  154. or1771
    • SHORT
  155. or0-or1778
    • Intergenic region with hits
  156. or1798
    • From AutoQA
  157. or1806-or1807
    • Intergenic region with hits
  158. or1824-or1825
    • Intergenic region with hits
  159. -
    • Intergenic region with hits
  160. or0-or1836
    • Intergenic region with hits
  161. or1859
    • SHORT
  162. or1870
    • SHORT
  163. or1871-or1872
    • Intergenic region with hits
  164. or1884-or1885
    • Intergenic region with hits
  165. or1907-or1908
    • Intergenic region with hits
  166. or1908
  167. or1909
  168. or1910
    • SHORT
  169. or1921
    • SHORT
  170. or0-or1927
    • Intergenic region with hits
  171. or1929
    • SHORT
  172. or1929-or1929
    • Intergenic region with hits
  173. or1931
    • SHORT
  174. or1956
    • SHORT
  175. or1963
    • From AutoQA
  176. or2010
    • LONG
  177. or2030
  178. or2031
  179. or2042
    • From AutoQA
  180. or2060
    • From AutoQA
  181. or2061
  182. or2063
    • SHORT
  183. or2064-or2065
    • Intergenic region with hits
  184. -
    • Intergenic region with hits
  185. -
    • Intergenic region with hits
  186. or2072-or2073
    • Intergenic region with hits
  187. or2103
    • SHORT
  188. or2104
    • From AutoQA
  189. or2108
  190. or2109
  191. or2110
    • SHORT
  192. or2111
    • SHORT
  193. or2129-or2129
    • Intergenic region with hits
  194. or2142
    • From AutoQA
  195. or2179
    • SHORT
    • Overlap with or2180(40)
  196. or2181-or2182
    • Intergenic region with hits
  197. or2193-or2194
    • Intergenic region with hits
  198. or2195
    • Overlap with or2194(34)
  199. or2228
  200. or2229
  201. or2229-or2229
    • Intergenic region with hits
  202. -
    • Intergenic region with hits
  203. or0-or2231
    • Intergenic region with hits
  204. or2231
    • From AutoQA
  205. or2233
  206. or2234
  207. or2235
  208. or0-or2239
    • Intergenic region with hits
  209. or2247
    • Overlap with or2248(37)
  210. or2248
    • Overlap with or2247(37)
  211. or2252-or2253
    • Intergenic region with hits
  212. or2262
    • From AutoQA
  213. or2300
    • SHORT
  214. or0-or2303
    • Intergenic region with hits
  215. or2347
  216. or2348
  217. or2349
    • SHORT
  218. or2350
    • SHORT
  219. or2356
    • SHORT
  220. or2357
  221. or2357-or2358
    • Intergenic region with hits
  222. or2358
  223. or0-or2429
    • Intergenic region with hits
  224. or2458
    • SHORT
  225. or2465
    • From AutoQA
  226. or2465-or2465
    • Intergenic region with hits
  227. or0-or2467
    • Intergenic region with hits
  228. or2501-or2502
    • Intergenic region with hits
  229. or2513-or2514
    • Intergenic region with hits
  230. -
    • Intergenic region with hits
  231. -
    • Intergenic region with hits
  232. or2559-or2560
    • Intergenic region with hits
  233. or2588
  234. or2589
  235. or2656-or2657
    • Intergenic region with hits
  236. or2662
    • SHORT
  237. or2689
  238. or2689-or2690
    • Intergenic region with hits
  239. or2690
  240. or2703
  241. or2704
  242. or2706-or2707
    • Intergenic region with hits
  243. or2714
    • Overlap with or2715(31)
  244. or2715
    • Overlap with or2714(31)
  245. or2726
    • LONG
  246. or2739-or2740
    • Intergenic region with hits
  247. or2783-or2783
    • Intergenic region with hits
  248. or0-or2787
    • Intergenic region with hits
  249. or2796-or2798
    • Intergenic region with hits
  250. or2812
  251. or2813
  252. or2814-or2814
    • Intergenic region with hits
Click on an anomaly in the left bar to view the associated alignment.