Hydrogenobaculum sp. Strain SO
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1620 predicted CDSs,
7 long genes,
19 short genes,
28 broken genes,
24 interrupted genes,
19 intergenic regions with hits,
97 total anomalies.
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View pseudogenes 		Gene prediction anomalies
Chart?chtt=&chs=400x180&chd=s:aaaaaaa9&cht=p3&chl=long-0%%7cshort-1%%7cunique-0%%7cdubious-0%%7cbroken-1%%7cinterrupted-1%%7cambiguous-0%%7cok-97% 		Anomaly distribution
Chart?chtt=&chs=500x180&chd=s:pp90p&cht=p3&chl=long-7%%7cshort-19%%7cbroken-28%%7cinterrupted-24%%7cputative+missed-19%
Defectlist
Alns
  1. HydSO_00000060
    • From AutoQA
  2. HydSO_00000060-HydSO_00000070
    • Intergenic region with hits
  3. HydSO_00000100
    • Overlap with HydSO_00000110(37)
  4. HydSO_00000110
    • Overlap with HydSO_00000100(37)
  5. HydSO_00000230
  6. HydSO_00000240
  7. HydSO_00000580
    • SHORT
  8. HydSO_00000850
  9. HydSO_00000860
  10. HydSO_00000880-HydSO_00000890
    • Intergenic region with hits
  11. HydSO_00000910
    • Overlap with HydSO_00000920(606)
  12. HydSO_00000920
    • Overlap with HydSO_00000910(606)
  13. HydSO_00001090
    • SHORT
  14. HydSO_00001100
    • SHORT
  15. HydSO_00001130
  16. HydSO_00001130-HydSO_00001140
    • Intergenic region with hits
  17. HydSO_00001140
  18. HydSO_00001360
  19. HydSO_00001370
  20. HydSO_00001770
    • Overlap with HydSO_00001780(37)
  21. HydSO_00001780
    • Overlap with HydSO_00001770(37)
  22. HydSO_00002230
    • Overlap with HydSO_00002240(31)
  23. HydSO_00002240
    • Overlap with HydSO_00002230(31)
  24. HydSO_00002410
    • SHORT
  25. orf_CrispR1
    • CrispR orf_CrispR1 CRISPR 1 240554 243886
  26. HydSO_00002470
    • SHORT
  27. HydSO_00002820
    • SHORT
  28. HydSO_00003150
    • Overlap with HydSO_00003160(37)
  29. HydSO_00003160
    • Overlap with HydSO_00003150(37)
  30. orf_CrispR2
    • CrispR orf_CrispR2 CRISPR 1 308265 308761
  31. HydSO_00003830
    • Overlap with HydSO_00003840(57)
  32. HydSO_00003840
    • Overlap with HydSO_00003830(57)
  33. HydSO_00003880
    • From AutoQA
  34. HydSO_00003910
    • Overlap with HydSO_00003900(34)
  35. orf_CrispR3
    • CrispR orf_CrispR3 CRISPR 1 401434 401858
  36. orf_CrispR4
    • CrispR orf_CrispR4 CRISPR 1 403453 404598
  37. HydSO_00004370
    • SHORT
  38. HydSO_00004390-HydSO_00004410
    • Intergenic region with hits
  39. HydSO_00004890
    • Overlap with HydSO_00004900(37)
  40. HydSO_00004900
    • SHORT
    • Overlap with HydSO_00004890(37)
  41. HydSO_00004900-HydSO_00004910
    • Intergenic region with hits
  42. HydSO_00004910
  43. HydSO_00004920
  44. HydSO_00005080
    • LONG
  45. HydSO_00005120
    • SHORT
  46. HydSO_00005230-HydSO_00005250
    • Intergenic region with hits
  47. HydSO_00005270
    • Overlap with HydSO_00005280(49)
  48. HydSO_00005280
    • Overlap with HydSO_00005270(49)
  49. HydSO_00005440
    • Overlap with HydSO_00005450(64)
  50. HydSO_00005450
    • Overlap with HydSO_00005440(64)
  51. HydSO_00005520-HydSO_00005530
    • Intergenic region with hits
  52. HydSO_00005630
    • Overlap with HydSO_00005640(46)
  53. HydSO_00005640
    • Overlap with HydSO_00005630(46)
  54. HydSO_00005760
    • Overlap with HydSO_00005770(31)
  55. HydSO_00005770
    • Overlap with HydSO_00005760(31)
  56. HydSO_00005850
    • SHORT
  57. HydSO_00005910
    • Overlap with HydSO_00005920(36)
  58. HydSO_00005920
    • Overlap with HydSO_00005910(36)
  59. HydSO_00005940-HydSO_00005950
    • Intergenic region with hits
  60. HydSO_00005970
    • Overlap with HydSO_00005980(606)
  61. HydSO_00005980
    • Overlap with HydSO_00005970(606)
  62. HydSO_00006250
  63. HydSO_00006260
  64. HydSO_00006280
    • Overlap with HydSO_00006290(43)
  65. HydSO_00006290
    • Overlap with HydSO_00006280(43)
  66. HydSO_00006650-HydSO_00006660
    • Intergenic region with hits
  67. HydSO_00007230
    • SHORT
  68. HydSO_00007230-HydSO_00007240
    • Intergenic region with hits
  69. HydSO_00007240
    • From AutoQA
  70. HydSO_00007370
    • From AutoQA
  71. HydSO_00007540
    • From AutoQA
  72. HydSO_00007770
    • Overlap with HydSO_00007780(34)
  73. HydSO_00007780
    • Overlap with HydSO_00007770(34)
  74. HydSO_00007790
    • LONG
  75. HydSO_00007830
    • Overlap with HydSO_00007840(49)
  76. HydSO_00007840
    • Overlap with HydSO_00007830(49)
  77. orf_CrispR1
    • CrispR orf_CrispR1 CRISPR 1 50905 51591
  78. HydSO_00008070
    • From AutoQA
  79. HydSO_00008710
  80. HydSO_00008720
  81. HydSO_00008860
    • Overlap with HydSO_00008870(34)
  82. HydSO_00008870
    • Overlap with HydSO_00008860(34)
  83. HydSO_00009120
  84. HydSO_00009530
    • Overlap with HydSO_00009540(31)
  85. HydSO_00009540
    • Overlap with HydSO_00009530(31)
  86. HydSO_00009660
  87. HydSO_00009660-HydSO_00009670
    • Intergenic region with hits
  88. HydSO_00009670
  89. HydSO_00009680-HydSO_00009690
    • Intergenic region with hits
  90. HydSO_00009780
    • SHORT
  91. HydSO_00010160
    • Overlap with HydSO_00010170(52)
  92. HydSO_00010170
    • Overlap with HydSO_00010160(52)
  93. HydSO_00010200
    • SHORT
  94. HydSO_00010230
  95. HydSO_00010240
  96. HydSO_00010460
    • SHORT
  97. HydSO_00010570
    • LONG
  98. HydSO_00010700
    • Overlap with HydSO_00010710(40)
  99. HydSO_00010710
    • Overlap with HydSO_00010700(40)
  100. HydSO_00010920
    • From AutoQA
  101. HydSO_00010940
    • Overlap with HydSO_00010950(52)
  102. HydSO_00010950
    • SHORT
    • Overlap with HydSO_00010940(52)
  103. HydSO_00011150-HydSO_00011160
    • Intergenic region with hits
  104. HydSO_00011170
    • LONG
  105. HydSO_00011250
    • SHORT
  106. HydSO_00011480
    • Overlap with HydSO_00011490(43)
  107. HydSO_00011490
    • Overlap with HydSO_00011480(43)
  108. HydSO_00011580
  109. HydSO_00011580-HydSO_00011590
    • Intergenic region with hits
  110. HydSO_00011590
  111. HydSO_00011660
  112. HydSO_00011670
  113. HydSO_00011890-HydSO_00011900
    • Intergenic region with hits
  114. HydSO_00012290
    • From AutoQA
  115. HydSO_00012360
    • Overlap with HydSO_00012370(37)
  116. HydSO_00012370
    • Overlap with HydSO_00012360(37)
  117. HydSO_00012430
    • From AutoQA
  118. HydSO_00012670
    • SHORT
  119. HydSO_00012740
  120. HydSO_00012750
  121. HydSO_00012780
    • From AutoQA
  122. HydSO_00012800
    • Overlap with HydSO_00012810(31)
  123. HydSO_00012810
    • Overlap with HydSO_00012800(31)
  124. HydSO_00013010
    • Overlap with HydSO_00013020(43)
  125. HydSO_00013020
    • Overlap with HydSO_00013010(43)
  126. HydSO_00013590-HydSO_00013610
    • Intergenic region with hits
  127. HydSO_00013830
    • LONG
  128. HydSO_00013890
    • SHORT
  129. HydSO_00014010
    • LONG
  130. HydSO_00014500-HydSO_00014520
    • Intergenic region with hits
  131. HydSO_00014520
    • Overlap with HydSO_00014530(34)
  132. HydSO_00014530
    • Overlap with HydSO_00014520(34)
  133. HydSO_00014680-HydSO_00014690
    • Intergenic region with hits
  134. HydSO_00014690
    • From AutoQA
  135. HydSO_00014710
  136. HydSO_00014720
  137. orf_CrispR1
    • CrispR orf_CrispR1 CRISPR 1 558250 558548
  138. HydSO_00014740
  139. HydSO_00014750
  140. HydSO_00014760
    • SHORT
  141. orf_CrispR2
    • CrispR orf_CrispR2 CRISPR 1 564660 564821
  142. HydSO_00014960
    • From AutoQA
  143. HydSO_00015340
    • LONG
  144. HydSO_00015360
    • Overlap with HydSO_00015370(49)
  145. HydSO_00015370
    • Overlap with HydSO_00015360(49)
  146. HydSO_00015390
    • Overlap with HydSO_00015400(43)
  147. HydSO_00015400
    • Overlap with HydSO_00015390(43)
  148. HydSO_00015450-HydSO_00015460
    • Intergenic region with hits
  149. HydSO_00015930
    • From AutoQA
  150. HydSO_00015960
    • From AutoQA
  151. HydSO_00015970
    • Overlap with HydSO_00015980(40)
Click on an anomaly in the left bar to view the associated alignment.