Flexibacter litoralis DSM 6794
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4056 predicted CDSs,
105 long genes,
71 short genes,
47 broken genes,
34 interrupted genes,
116 intergenic regions with hits,
373 total anomalies.
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View pseudogenes 		Gene prediction anomalies
Chart?chtt=&chs=400x180&chd=s:baaaaaa9&cht=p3&chl=long-2%%7cshort-1%%7cunique-0%%7cdubious-0%%7cbroken-1%%7cinterrupted-0%%7cambiguous-0%%7cok-96% 		Anomaly distribution
Chart?chtt=&chs=500x180&chd=s:3lxr9&cht=p3&chl=long-28%%7cshort-19%%7cbroken-12%%7cinterrupted-9%%7cputative+missed-31%
Defectlist
Alns
  1. Fleli_00000080
    • LONG
  2. orf_CrispR1
    • CrispR orf_CrispR1 CRISPR 1 11266 12758
  3. Fleli_00000270-Fleli_00000280
    • Intergenic region with hits
  4. Fleli_00000330-Fleli_00000350
    • Intergenic region with hits
  5. Fleli_00000350
  6. Fleli_00000360
  7. Fleli_00000370
    • SHORT
  8. Fleli_00000410
    • LONG
  9. Fleli_00000730
    • SHORT
  10. Fleli_00000750
    • SHORT
  11. Fleli_00000770
    • SHORT
  12. Fleli_00000820
    • SHORT
  13. Fleli_00000860-Fleli_00000880
    • Intergenic region with hits
  14. Fleli_00000980
    • LONG
  15. Fleli_00001020
  16. Fleli_00001030
  17. Fleli_00001230
    • LONG
  18. Fleli_00001280
    • LONG
  19. Fleli_00001420
    • SHORT
  20. Fleli_00001440
    • SHORT
  21. Fleli_00001460
    • SHORT
  22. Fleli_00001500
    • SHORT
  23. Fleli_00001520
    • SHORT
  24. Fleli_00001550
  25. Fleli_00001560
  26. Fleli_00001570
  27. Fleli_00001600
  28. Fleli_00001610
  29. Fleli_00001620
  30. orf_CrispR2
    • CrispR orf_CrispR2 CRISPR 1 205432 206414
  31. Fleli_00001790-Fleli_00001840
    • Intergenic region with hits
  32. Fleli_00001860
    • SHORT
  33. Fleli_00001890
    • SHORT
  34. Fleli_00001910
    • SHORT
  35. Fleli_00001970
    • SHORT
  36. Fleli_00002120
    • LONG
  37. Fleli_00002120-Fleli_00002140
    • Intergenic region with hits
  38. Fleli_00002180-Fleli_00002190
    • Intergenic region with hits
  39. Fleli_00002260
    • From AutoQA
  40. Fleli_00002370
    • From AutoQA
  41. Fleli_00002380
    • SHORT
  42. Fleli_00002380-Fleli_00002420
    • Intergenic region with hits
  43. Fleli_00002440
    • LONG
  44. Fleli_00002550-Fleli_00002570
    • Intergenic region with hits
  45. Fleli_00002570
    • LONG
  46. Fleli_00002670-Fleli_00002720
    • Intergenic region with hits
  47. Fleli_00002780
    • SHORT
  48. Fleli_00002860
    • From AutoQA
  49. Fleli_00002880
    • Overlap with Fleli_00002890(57)
  50. Fleli_00002960
    • From AutoQA
  51. Fleli_00002970
  52. Fleli_00002990
    • SHORT
  53. Fleli_00003120
    • LONG
  54. Fleli_00003240
  55. Fleli_00003260
  56. Fleli_00003270
    • From AutoQA
  57. Fleli_00003290-Fleli_00003360
    • Intergenic region with hits
  58. Fleli_00003550-Fleli_00003570
    • Intergenic region with hits
  59. Fleli_00003780
    • SHORT
  60. Fleli_00003840
    • LONG
  61. Fleli_00003890-Fleli_00003910
    • Intergenic region with hits
  62. Fleli_00003910
    • SHORT
  63. Fleli_00003980-Fleli_00004040
    • Intergenic region with hits
  64. Fleli_00004230-Fleli_00004250
    • Intergenic region with hits
  65. Fleli_00004290
    • Overlap with Fleli_00004300(31)
  66. Fleli_00004300
    • Overlap with Fleli_00004290(31)
  67. Fleli_00004440
    • LONG
  68. Fleli_00004900
    • SHORT
  69. Fleli_00005160-Fleli_00005190
    • Intergenic region with hits
  70. Fleli_00005200
    • LONG
  71. Fleli_00005270
    • Overlap with Fleli_00005280(2388)
  72. Fleli_00005280
    • Overlap with Fleli_00005270(2388)
  73. Fleli_00005300-Fleli_00005310
    • Intergenic region with hits
  74. Fleli_00005390
    • LONG
  75. Fleli_00005620
    • LONG
  76. Fleli_00005900-Fleli_00005910
    • Intergenic region with hits
  77. Fleli_00006010-Fleli_00006040
    • Intergenic region with hits
  78. Fleli_00006140
    • LONG
  79. Fleli_00006200
    • Overlap with Fleli_00006210(70)
  80. Fleli_00006210
    • Overlap with Fleli_00006200(70)
  81. Fleli_00006450
    • LONG
  82. Fleli_00006530-Fleli_00006550
    • Intergenic region with hits
  83. Fleli_00006550-Fleli_00006570
    • Intergenic region with hits
  84. Fleli_00006680
    • LONG
  85. Fleli_00006820
    • LONG
  86. Fleli_00007140-Fleli_00007160
    • Intergenic region with hits
  87. Fleli_00007410
    • LONG
  88. Fleli_00007530
    • LONG
  89. Fleli_00007820
    • LONG
  90. Fleli_00007890
    • SHORT
  91. Fleli_00008230
    • SHORT
  92. Fleli_00008400
    • From AutoQA
  93. Fleli_00008400-Fleli_00008410
    • Intergenic region with hits
  94. Fleli_00008550
    • SHORT
  95. Fleli_00008770
  96. Fleli_00008780
  97. Fleli_00008880
    • From AutoQA
  98. Fleli_00008930
    • SHORT
  99. Fleli_00008970
    • LONG
  100. Fleli_00009090-Fleli_00009120
    • Intergenic region with hits
  101. Fleli_00009120
    • SHORT
  102. Fleli_00009230
    • LONG
  103. Fleli_00009320-Fleli_00009380
    • Intergenic region with hits
  104. Fleli_00009530-Fleli_00009560
    • Intergenic region with hits
  105. Fleli_00009630-Fleli_00009660
    • Intergenic region with hits
  106. Fleli_00009660
    • LONG gene with <100 nt promoter
  107. Fleli_00009670
    • LONG gene with <100 nt promoter
  108. Fleli_00009720-Fleli_00009750
    • Intergenic region with hits
  109. Fleli_00009770
    • From AutoQA
  110. Fleli_00009850
  111. Fleli_00009860
  112. Fleli_00009860-Fleli_00009890
    • Intergenic region with hits
  113. Fleli_00009960-Fleli_00009980
    • Intergenic region with hits
  114. Fleli_00010070
    • SHORT
  115. Fleli_00010090-Fleli_00010110
    • Intergenic region with hits
  116. Fleli_00010150
    • Overlap with Fleli_00010160(43)
  117. Fleli_00010160
    • Overlap with Fleli_00010150(43)
  118. Fleli_00010220-Fleli_00010250
    • Intergenic region with hits
  119. Fleli_00010320
    • From AutoQA
  120. Fleli_00010350
    • LONG
  121. Fleli_00010460
    • LONG
  122. Fleli_00010630
  123. Fleli_00010640
  124. Fleli_00010660
    • Overlap with Fleli_00010670(2388)
  125. Fleli_00010670
    • Overlap with Fleli_00010660(2388)
  126. Fleli_00010690-Fleli_00010700
    • Intergenic region with hits
  127. Fleli_00010970-Fleli_00011000
    • Intergenic region with hits
  128. Fleli_00011120-Fleli_00011150
    • Intergenic region with hits
  129. Fleli_00011260
    • LONG gene with <100 nt promoter
  130. Fleli_00011720
  131. Fleli_00011730
  132. Fleli_00011940
    • LONG
  133. Fleli_00011980-Fleli_00011990
    • Intergenic region with hits
  134. Fleli_00012080-Fleli_00012110
    • Intergenic region with hits
  135. Fleli_00012130
    • LONG
  136. Fleli_00012260-Fleli_00012280
    • Intergenic region with hits
  137. Fleli_00012370
    • LONG
  138. Fleli_00012700-Fleli_00012710
    • Intergenic region with hits
  139. Fleli_00012910
    • SHORT
  140. Fleli_00013100
    • Overlap with Fleli_00013110(149)
  141. Fleli_00013110
    • Overlap with Fleli_00013100(149)
  142. Fleli_00013220
    • LONG
  143. Fleli_00013460
    • LONG
  144. Fleli_00013560
  145. Fleli_00013570
  146. Fleli_00013690
    • From AutoQA
  147. Fleli_00013700
    • From AutoQA
  148. Fleli_00013790-Fleli_00013800
    • Intergenic region with hits
  149. Fleli_00014090
    • SHORT
  150. Fleli_00014120
    • LONG
  151. orf_CrispR3
    • CrispR orf_CrispR3 CRISPR 1 1678085 1679372
  152. Fleli_00014530
    • SHORT
  153. Fleli_00014700
    • LONG
  154. Fleli_00014750
  155. Fleli_00014760
  156. Fleli_00014890
    • Overlap with Fleli_00014900(57)
  157. Fleli_00014900
    • Overlap with Fleli_00014890(57)
  158. Fleli_00014940
    • LONG
  159. Fleli_00014940-Fleli_00014950
    • Intergenic region with hits
  160. Fleli_00015000
    • LONG
  161. Fleli_00015070
    • LONG
  162. Fleli_00015120
    • SHORT
  163. Fleli_00015140-Fleli_00015170
    • Intergenic region with hits
  164. Fleli_00015290
    • From AutoQA
  165. Fleli_00015350-Fleli_00015380
    • Intergenic region with hits
  166. Fleli_00015390
    • SHORT
  167. Fleli_00015500
    • SHORT
  168. Fleli_00015600
    • From AutoQA
  169. Fleli_00015680
    • LONG
  170. Fleli_00015920
    • LONG gene with <100 nt promoter
  171. Fleli_00015950-Fleli_00015970
    • Intergenic region with hits
  172. Fleli_00015980
    • LONG
  173. Fleli_00015980-Fleli_00015990
    • Intergenic region with hits
  174. Fleli_00016280
    • LONG
  175. Fleli_00016350-Fleli_00016380
    • Intergenic region with hits
  176. Fleli_00016550-Fleli_00016560
    • Intergenic region with hits
  177. Fleli_00016640-Fleli_00016660
    • Intergenic region with hits
  178. Fleli_00016950
    • From AutoQA
  179. Fleli_00016960
    • From AutoQA
  180. Fleli_00017210
    • From AutoQA
  181. Fleli_00017230
    • From AutoQA
  182. Fleli_00017230-Fleli_00017240
    • Intergenic region with hits
  183. Fleli_00017280
    • From AutoQA
  184. Fleli_00017300
    • Overlap with Fleli_00017310(2388)
  185. Fleli_00017310
    • Overlap with Fleli_00017300(2388)
  186. Fleli_00017330-Fleli_00017340
    • Intergenic region with hits
  187. Fleli_00017480
    • LONG
  188. Fleli_00017880
    • LONG
  189. Fleli_00017970
  190. Fleli_00017990
  191. Fleli_00018000
    • SHORT
  192. Fleli_00018020
    • Overlap with Fleli_00018010(31)
  193. Fleli_00018070-Fleli_00018120
    • Intergenic region with hits
  194. Fleli_00018250-Fleli_00018270
    • Intergenic region with hits
  195. Fleli_00018440
    • SHORT
  196. Fleli_00018510-Fleli_00018550
    • Intergenic region with hits
  197. Fleli_00018620-Fleli_00018640
    • Intergenic region with hits
  198. Fleli_00018640
    • Overlap with Fleli_00018650(49)
  199. Fleli_00018650
    • Overlap with Fleli_00018640(49)
  200. Fleli_00018670
    • SHORT
  201. Fleli_00018680-Fleli_00018700
    • Intergenic region with hits
  202. Fleli_00018720-Fleli_00018730
    • Intergenic region with hits
  203. Fleli_00018880-Fleli_00018890
    • Intergenic region with hits
  204. Fleli_00018920
    • SHORT
  205. Fleli_00019020
  206. Fleli_00019040
  207. Fleli_00019120
    • From AutoQA
  208. Fleli_00019130-Fleli_00019140
    • Intergenic region with hits
  209. Fleli_00019410
    • From AutoQA
  210. Fleli_00019420
    • SHORT
  211. Fleli_00019610
  212. Fleli_00019620
  213. Fleli_00019630
    • SHORT
  214. Fleli_00019650
  215. Fleli_00019660
  216. Fleli_00019830-Fleli_00019850
    • Intergenic region with hits
  217. Fleli_00020100-Fleli_00020120
    • Intergenic region with hits
  218. Fleli_00020130
    • From AutoQA
  219. Fleli_00020280
    • Overlap with Fleli_00020290(43)
  220. Fleli_00020290
    • Overlap with Fleli_00020280(43)
  221. Fleli_00020530
    • LONG
  222. Fleli_00020580
    • LONG
  223. Fleli_00020610
    • SHORT
  224. Fleli_00020780-Fleli_00020820
    • Intergenic region with hits
  225. Fleli_00020860
    • SHORT
  226. Fleli_00020880-Fleli_00020900
    • Intergenic region with hits
  227. Fleli_00020960
    • LONG
  228. Fleli_00021480
    • SHORT
  229. Fleli_00021620
  230. Fleli_00021630
  231. Fleli_00021650
    • LONG
  232. Fleli_00021690
    • LONG
  233. Fleli_00021890
    • SHORT
  234. Fleli_00021990
    • SHORT
  235. Fleli_00022020
    • LONG
  236. Fleli_00022090-Fleli_00022120
    • Intergenic region with hits
  237. Fleli_00022270
    • LONG
  238. Fleli_00022310
  239. Fleli_00022430
  240. Fleli_00022450
  241. Fleli_00022520
    • Overlap with Fleli_00022530(49)
  242. Fleli_00022530
    • Overlap with Fleli_00022520(49)
  243. Fleli_00022670-Fleli_00022680
    • Intergenic region with hits
  244. Fleli_00022760-Fleli_00022770
    • Intergenic region with hits
  245. Fleli_00022790
    • LONG
  246. Fleli_00022810
    • From AutoQA
  247. Fleli_00022900
    • SHORT
  248. Fleli_00022960
    • LONG
  249. Fleli_00023100
    • LONG
  250. Fleli_00023120
    • SHORT
  251. Fleli_00023180
    • SHORT
  252. Fleli_00023240
    • LONG
  253. Fleli_00023510
    • SHORT
  254. Fleli_00023540
    • SHORT
  255. Fleli_00023680-Fleli_00023730
    • Intergenic region with hits
  256. Fleli_00023730
  257. Fleli_00023760
  258. Fleli_00023880
    • LONG
  259. Fleli_00023900
    • SHORT
  260. Fleli_00023900-Fleli_00023940
    • Intergenic region with hits
  261. Fleli_00023940
    • Overlap with Fleli_00023950(57)
  262. Fleli_00023950
    • Overlap with Fleli_00023940(57)
  263. Fleli_00023970-Fleli_00024000
    • Intergenic region with hits
  264. Fleli_00024000-Fleli_00024040
    • Intergenic region with hits
  265. Fleli_00024040
  266. Fleli_00024050
  267. Fleli_00024070
    • LONG
  268. Fleli_00024350
    • From AutoQA
  269. Fleli_00024370
    • LONG
  270. Fleli_00024380-Fleli_00024400
    • Intergenic region with hits
  271. Fleli_00024460-Fleli_00024470
    • Intergenic region with hits
  272. Fleli_00024480
    • LONG
  273. Fleli_00024530
    • LONG gene with <100 nt promoter
  274. Fleli_00024560
    • SHORT
  275. Fleli_00024640
    • LONG
  276. Fleli_00024650
    • LONG
  277. Fleli_00024710
    • SHORT
  278. Fleli_00024830
    • Overlap with Fleli_00024840(57)
  279. Fleli_00024840
    • Overlap with Fleli_00024830(57)
  280. Fleli_00024920
    • Overlap with Fleli_00024930(40)
  281. Fleli_00024930
    • Overlap with Fleli_00024920(40)
  282. Fleli_00024990-Fleli_00025000
    • Intergenic region with hits
  283. Fleli_00025190-Fleli_00025210
    • Intergenic region with hits
  284. Fleli_00025400
    • LONG
  285. Fleli_00025500-Fleli_00025530
    • Intergenic region with hits
  286. Fleli_00025670
    • LONG
  287. Fleli_00025770
    • LONG
  288. Fleli_00026010
    • SHORT
  289. Fleli_00026020-Fleli_00026050
    • Intergenic region with hits
  290. Fleli_00026330-Fleli_00026350
    • Intergenic region with hits
  291. Fleli_00026610
    • LONG
  292. Fleli_00026620
    • SHORT
  293. Fleli_00026710
    • LONG
  294. Fleli_00026820
    • SHORT
  295. Fleli_00027030
    • SHORT
  296. Fleli_00027310-Fleli_00027320
    • Intergenic region with hits
  297. Fleli_00027470-Fleli_00027490
    • Intergenic region with hits
  298. Fleli_00027790-Fleli_00027810
    • Intergenic region with hits
  299. Fleli_00028070
    • LONG
  300. Fleli_00028120
    • LONG
  301. Fleli_00028520
    • LONG
  302. Fleli_00028640-Fleli_00028670
    • Intergenic region with hits
  303. Fleli_00028670-Fleli_00028690
    • Intergenic region with hits
  304. Fleli_00028910
  305. Fleli_00028920
  306. Fleli_00028920-Fleli_00028960
    • Intergenic region with hits
  307. Fleli_00029110
  308. Fleli_00029150
    • SHORT
  309. Fleli_00029170-Fleli_00029190
    • Intergenic region with hits
  310. Fleli_00029210
    • LONG
  311. Fleli_00029430-Fleli_00029450
    • Intergenic region with hits
  312. Fleli_00029470
    • From AutoQA
  313. Fleli_00029470-Fleli_00029480
    • Intergenic region with hits
  314. Fleli_00029520-Fleli_00029530
    • Intergenic region with hits
  315. Fleli_00029540-Fleli_00029560
    • Intergenic region with hits
  316. Fleli_00029560-Fleli_00029600
    • Intergenic region with hits
  317. Fleli_00029630
    • SHORT
  318. Fleli_00029750
    • SHORT
  319. Fleli_00029750-Fleli_00029760
    • Intergenic region with hits
  320. Fleli_00029960
    • SHORT
  321. Fleli_00030210
    • LONG
  322. Fleli_00030250-Fleli_00030270
    • Intergenic region with hits
  323. Fleli_00030270
  324. Fleli_00030280
  325. Fleli_00030370
    • LONG
  326. Fleli_00030660
    • LONG
  327. Fleli_00030670-Fleli_00030690
    • Intergenic region with hits
  328. Fleli_00031000
  329. Fleli_00031010
  330. Fleli_00031320
  331. Fleli_00031330
  332. Fleli_00031380
    • LONG
  333. Fleli_00031510
    • SHORT
  334. Fleli_00031580
    • LONG
  335. Fleli_00031610
    • SHORT
  336. Fleli_00031640
    • Overlap with Fleli_00031650(57)
  337. Fleli_00031650
    • Overlap with Fleli_00031640(57)
  338. Fleli_00031890
    • SHORT
  339. Fleli_00031910
    • SHORT
  340. Fleli_00031930
    • SHORT
  341. Fleli_00031950
    • SHORT
  342. Fleli_00032070
    • Overlap with Fleli_00032080(31)
  343. Fleli_00032080
    • Overlap with Fleli_00032070(31)
  344. Fleli_00032330
    • LONG
  345. Fleli_00032340
    • LONG
  346. Fleli_00032460
    • LONG
  347. Fleli_00032530
    • Overlap with Fleli_00032540(37)
  348. Fleli_00032540
    • Overlap with Fleli_00032530(37)
  349. Fleli_00032640-Fleli_00032660
    • Intergenic region with hits
  350. Fleli_00032780
    • SHORT
  351. Fleli_00032830
    • From AutoQA
  352. Fleli_00033020-Fleli_00033050
    • Intergenic region with hits
  353. Fleli_00033060-Fleli_00033080
    • Intergenic region with hits
  354. Fleli_00033110-Fleli_00033120
    • Intergenic region with hits
  355. Fleli_00033120
    • LONG
  356. Fleli_00033160-Fleli_00033180
    • Intergenic region with hits
  357. Fleli_00033370-Fleli_00033420
    • Intergenic region with hits
  358. Fleli_00033510-Fleli_00033530
    • Intergenic region with hits
  359. Fleli_00033600
    • LONG
  360. Fleli_00033810
  361. Fleli_00033820
  362. Fleli_00033830-Fleli_00033840
    • Intergenic region with hits
  363. Fleli_00033860
  364. Fleli_00033870
  365. Fleli_00033900
    • From AutoQA
  366. Fleli_00033900-Fleli_00034010
    • Intergenic region with hits
  367. Fleli_00034010-Fleli_00034020
    • Intergenic region with hits
  368. Fleli_00034120
    • SHORT
  369. Fleli_00034200-Fleli_00034210
    • Intergenic region with hits
  370. Fleli_00034620
    • LONG
  371. Fleli_00034810
  372. Fleli_00034820
  373. Fleli_00034830
  374. Fleli_00034890-Fleli_00034910
    • Intergenic region with hits
  375. Fleli_00034920
    • LONG
  376. Fleli_00034930
    • LONG
  377. Fleli_00035020
    • LONG
  378. Fleli_00035310
    • LONG
  379. Fleli_00035430
    • LONG
  380. Fleli_00035490
    • SHORT
  381. Fleli_00035570
    • LONG
  382. Fleli_00035570-Fleli_00035580
    • Intergenic region with hits
  383. Fleli_00035730-Fleli_00035740
    • Intergenic region with hits
  384. Fleli_00035740
    • LONG
  385. Fleli_00035920
    • From AutoQA
  386. Fleli_00035920-Fleli_00035930
    • Intergenic region with hits
  387. Fleli_00035950
    • LONG
  388. Fleli_00036130
    • LONG
  389. Fleli_00036550
    • From AutoQA
  390. Fleli_00036580
    • From AutoQA
  391. Fleli_00036590
    • SHORT
  392. Fleli_00036770
    • LONG
  393. Fleli_00036780-Fleli_00036810
    • Intergenic region with hits
  394. orf_CrispR4
    • CrispR orf_CrispR4 CRISPR 1 4376387 4376716
  395. Fleli_00036920-Fleli_00036930
    • Intergenic region with hits
  396. Fleli_00037030
    • LONG
  397. Fleli_00037240
    • From AutoQA
  398. Fleli_00037870
    • LONG
  399. Fleli_00037970
    • LONG
  400. Fleli_00037980
    • From AutoQA
  401. Fleli_00038270
    • LONG
  402. Fleli_00038310
  403. Fleli_00038320
    • Overlap with Fleli_00038330(70)
  404. Fleli_00038330
    • Interrupted gene with Fleli_00038310 
    • Overlap with Fleli_00038320(70)
  405. Fleli_00038660-Fleli_00038670
    • Intergenic region with hits
  406. Fleli_00038700
    • LONG
  407. Fleli_00038820-Fleli_00038850
    • Intergenic region with hits
  408. Fleli_00038890
    • LONG
  409. Fleli_00038960
    • LONG
  410. Fleli_00039080
    • LONG
  411. Fleli_00039100-Fleli_00039110
    • Intergenic region with hits
  412. Fleli_00039230
  413. Fleli_00039240
  414. Fleli_00039240-Fleli_00039270
    • Intergenic region with hits
  415. Fleli_00039270
    • LONG
  416. Fleli_00039560
    • From AutoQA
  417. Fleli_00039590
    • LONG
  418. Fleli_00039620
    • SHORT
  419. Fleli_00039690
    • SHORT
  420. Fleli_00040110-Fleli_00040130
    • Intergenic region with hits
  421. Fleli_00040510
    • LONG
  422. Fleli_00040550-Fleli_00040560
    • Intergenic region with hits
  423. Fleli_00040620-Fleli_00040630
    • Intergenic region with hits
  424. Fleli_00040780-Fleli_00040800
    • Intergenic region with hits
  425. Fleli_00040860-Fleli_00040870
    • Intergenic region with hits
  426. Fleli_00041170
    • LONG
  427. Fleli_00041200
    • LONG
Click on an anomaly in the left bar to view the associated alignment.