Emticicia oligotrophica DSM 17448, Contig 131
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3975 predicted CDSs,
90 long genes,
60 short genes,
13 broken genes,
8 interrupted genes,
107 intergenic regions with hits,
278 total anomalies.
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View pseudogenes 		Gene prediction anomalies
Chart?chtt=&chs=400x180&chd=s:badaaaa9&cht=p3&chl=long-2%%7cshort-1%%7cunique-5%%7cdubious-0%%7cbroken-0%%7cinterrupted-0%%7cambiguous-0%%7cok-92% 		Anomaly distribution
Chart?chtt=&chs=500x180&chd=s:zhgd9&cht=p3&chl=long-32%%7cshort-21%%7cbroken-4%%7cinterrupted-2%%7cputative+missed-38%
Defectlist
Alns
  1. or0008-or0009
    • Intergenic region with hits
  2. or0032
    • LONG
  3. or0099
    • LONG
  4. or0100-or0102
    • Intergenic region with hits
  5. or0112
    • LONG
  6. or0130-or0132
    • Intergenic region with hits
  7. or0132
    • LONG
  8. or0142
    • LONG
  9. or0155-or0156
    • Intergenic region with hits
  10. or0181
    • Overlap with or0182(37)
  11. or0182
    • Overlap with or0181(37)
  12. or0202-or0204
    • Intergenic region with hits
  13. or0218-or0219
    • Intergenic region with hits
  14. or0219
    • SHORT
  15. or0250-or0251
    • Intergenic region with hits
  16. or0258-or0259
    • Intergenic region with hits
  17. or0259
    • SHORT
  18. or0274
    • LONG
  19. or0319
    • LONG
  20. or0319-or0320
    • Intergenic region with hits
  21. or0336-or0338
    • Intergenic region with hits
  22. or0355-or0357
    • Intergenic region with hits
  23. or0362-or0364
    • Intergenic region with hits
  24. or0375-or0377
    • Intergenic region with hits
  25. or0382-or0383
    • Intergenic region with hits
  26. or0447
    • Interrupted gene with or0449 
  27. or0447-or0448
    • Intergenic region with hits
  28. or0449
    • Interrupted gene with or0447 
  29. or0496-or0498
    • Intergenic region with hits
  30. or0507-or0509
    • Intergenic region with hits
  31. or0565
    • Overlap with or0566(31)
  32. or0566
    • Overlap with or0565(31)
  33. or0567-or0569
    • Intergenic region with hits
  34. or0590-or0592
    • Intergenic region with hits
  35. or0652
    • LONG
  36. or0653
    • SHORT
  37. or0675
    • SHORT
  38. or0683
    • LONG
  39. or0697
    • LONG gene with <100 nt promoter
  40. or0708
    • SHORT
  41. or0716-or0718
    • Intergenic region with hits
  42. or0749-or0751
    • Intergenic region with hits
  43. or0763
    • LONG
  44. or0776
    • LONG
  45. or0782-or0783
    • Intergenic region with hits
  46. or0783
    • SHORT
  47. or0783-or0784
    • Intergenic region with hits
  48. or0787-or0788
    • Intergenic region with hits
  49. or0790
    • LONG
  50. or0823
    • Overlap with or0824(43)
  51. or0824
    • Overlap with or0823(43)
  52. or0859
    • LONG
  53. or0924
    • LONG
  54. or0974
    • LONG gene with <100 nt promoter
  55. or1008-or1009
    • Intergenic region with hits
  56. or1048-or1049
    • Intergenic region with hits
  57. or1055-or1056
    • Intergenic region with hits
  58. or1056-or1058
    • Intergenic region with hits
  59. or1074
    • SHORT
  60. or1077
    • LONG
  61. or1094
    • LONG
  62. or1136-or1137
    • Intergenic region with hits
  63. or1138-or1140
    • Intergenic region with hits
  64. or1150-or1152
    • Intergenic region with hits
  65. Newfeat3-or1170
    • Intergenic region with hits
  66. or1186
    • LONG
  67. or1199
    • LONG
  68. or1202-or1204
    • Intergenic region with hits
  69. or1226
    • LONG
  70. or1237
    • LONG
  71. or1251
    • Overlap with or1252(81)
  72. or1252
    • Overlap with or1251(81)
  73. or1271
    • LONG
  74. or1271-or1272
    • Intergenic region with hits
  75. or1302
    • LONG
  76. or1306
    • SHORT
  77. or1312
    • LONG
  78. or1319-or1321
    • Intergenic region with hits
  79. or1329
    • LONG gene with <100 nt promoter
  80. or1342-or1343
    • Intergenic region with hits
  81. or1351
    • LONG
  82. or1356-or1357
    • Intergenic region with hits
  83. or1357
    • LONG
  84. or1365
    • LONG
  85. or1375
  86. or1375-or1376
    • Intergenic region with hits
  87. or1376
  88. or1408
    • LONG
  89. or1444
    • SHORT
  90. or1466
    • LONG
  91. or1510
    • LONG
  92. or1522-or1525
    • Intergenic region with hits
  93. or1527-or1531
    • Intergenic region with hits
  94. or1533-or1537
    • Intergenic region with hits
  95. or1553
    • SHORT
  96. or1555
    • LONG
  97. or1568-or1569
    • Intergenic region with hits
  98. or1569-or1570
    • Intergenic region with hits
  99. or1570
    • SHORT
  100. or1583-or1584
    • Intergenic region with hits
  101. or1584
    • SHORT
  102. or1601
    • Overlap with or1602(34)
  103. or1602
    • Overlap with or1601(34)
  104. or1610-or1611
    • Intergenic region with hits
  105. or1611
    • SHORT
  106. or1626-or1628
    • Intergenic region with hits
  107. or1629
    • LONG
  108. or1631
    • LONG
  109. or1651
    • LONG
  110. or1670-or1671
    • Intergenic region with hits
  111. or1671
  112. or1671-or1672
    • Intergenic region with hits
  113. or1672
  114. or1674
    • LONG
  115. or1676
    • LONG
  116. or1676-or1677
    • Intergenic region with hits
  117. or1677
    • LONG
  118. or1680
    • Overlap with or1681(49)
  119. or1681
    • Overlap with or1680(49)
  120. or1686
    • SHORT
  121. or1689-or1690
    • Intergenic region with hits
  122. or1700
    • LONG
  123. or1712
    • SHORT
  124. or1719-or1721
    • Intergenic region with hits
  125. or1721
    • LONG
  126. or1721-or1722
    • Intergenic region with hits
  127. or1727-or1729
    • Intergenic region with hits
  128. or1743-or1744
    • Intergenic region with hits
  129. or1744
    • SHORT
  130. or1748
    • LONG
  131. or1752-Newfeat4
    • Intergenic region with hits
  132. or1770
    • LONG
  133. or1771
    • LONG
  134. or1815
    • SHORT
  135. or1824
    • SHORT
  136. or1832
    • LONG
  137. or1855
    • SHORT
  138. or1883
    • LONG
  139. or1897
    • LONG
  140. or1900
    • LONG
  141. or1900-or1901
    • Intergenic region with hits
  142. or1917
    • SHORT
  143. or1963
    • LONG
  144. or1991-or1992
    • Intergenic region with hits
  145. or1992
    • SHORT
  146. or1993-or1994
    • Intergenic region with hits
  147. or1998
    • LONG
  148. or2006
    • LONG
  149. or2014
    • Overlap with or2015(37)
  150. or2015
    • Overlap with or2014(37)
  151. or2016
    • LONG
  152. or2030-or2032
    • Intergenic region with hits
  153. or2035-or2038
    • Intergenic region with hits
  154. or2046
  155. or2047
  156. or2050
    • LONG
  157. or2085-or2086
    • Intergenic region with hits
  158. or2086
    • SHORT
  159. or2115-or2116
    • Intergenic region with hits
  160. or2116
    • SHORT
  161. or2122
    • LONG
  162. or2160
    • SHORT
  163. or2175
    • LONG
  164. or2177-or2178
    • Intergenic region with hits
  165. or2218
    • SHORT
  166. or2232
    • SHORT
  167. or2264
    • SHORT
  168. or2287
    • Overlap with or2288(37)
  169. or2288
    • Overlap with or2287(37)
  170. or2291
    • LONG
  171. or2335
    • LONG
  172. or2373
    • LONG
  173. or2377
    • SHORT
  174. or2415
  175. or2416
  176. or2422
    • LONG
  177. or2440
    • LONG
  178. or2451
    • LONG
    • Overlap with or2452(55)
  179. or2452
    • Overlap with or2451(55)
  180. or2453-or2454
    • Intergenic region with hits
  181. or2466
    • SHORT
  182. or2479
    • LONG
  183. or2493
  184. or2494
  185. or2494-or2495
    • Intergenic region with hits
  186. or2496
    • Overlap with or2495(34)
  187. or2497-or2500
    • Intergenic region with hits
  188. or2522
  189. or2523
  190. or2526
    • SHORT
  191. or2526-or2529
    • Intergenic region with hits
  192. or2536
    • LONG
  193. or2540-or2542
    • Intergenic region with hits
  194. or2555
    • LONG
  195. or2557-or2558
    • Intergenic region with hits
  196. or2570
    • SHORT
  197. or2573
    • Overlap with or2574(90)
  198. or2574
    • Overlap with or2573(90)
  199. or2647-or2650
    • Intergenic region with hits
  200. or2651
    • SHORT
  201. or2657-or2660
    • Intergenic region with hits
  202. or2680
  203. or2689
    • SHORT
  204. or2691
    • SHORT
  205. or2696
    • LONG
  206. or2759
    • SHORT
  207. or2759-or2760
    • Intergenic region with hits
  208. or2773
    • Overlap with or2774(43)
  209. or2816
    • LONG
  210. or2822
    • SHORT
  211. or2829
    • LONG
  212. or2830
    • SHORT
  213. or2830-or2831
    • Intergenic region with hits
  214. or2839-or2840
    • Intergenic region with hits
  215. or2842
    • SHORT
  216. or2846-or2847
    • Intergenic region with hits
  217. or2847-or2848
    • Intergenic region with hits
  218. or2854
    • SHORT
  219. or2855-or2859
    • Intergenic region with hits
  220. or2862-RNA_26
    • Intergenic region with hits
  221. or2886-or2887
    • Intergenic region with hits
  222. or2890
    • SHORT
  223. or2903-or2905
    • Intergenic region with hits
  224. or2911
    • SHORT
  225. or2926
    • LONG
  226. or2931
    • LONG
  227. or3020
    • LONG
  228. or3033-or3035
    • Intergenic region with hits
  229. or3051
    • SHORT
  230. or3056
    • Overlap with or3057(37)
  231. or3057
    • Overlap with or3056(37)
  232. or3058
    • SHORT
  233. or3059-or3060
    • Intergenic region with hits
  234. or3060-or3066
    • Intergenic region with hits
  235. or3068
    • SHORT
  236. or3069-or3071
    • Intergenic region with hits
  237. or3075-or3076
    • Intergenic region with hits
  238. or3076
    • SHORT
  239. or3091
    • SHORT
  240. or3092-or3095
    • Intergenic region with hits
  241. or3102-or3103
    • Intergenic region with hits
  242. or3186
    • LONG gene with <100 nt promoter
  243. or3221
    • SHORT
  244. or3221-or3222
    • Intergenic region with hits
  245. or3226
    • SHORT
  246. or3229
    • SHORT
  247. or3284-or3285
    • Intergenic region with hits
  248. or3289
    • SHORT
  249. or3309
    • Overlap with or3310(52)
  250. or3310
    • Overlap with or3309(52)
  251. or3332
    • SHORT
  252. or3341
    • LONG
  253. or3349-or3351
    • Intergenic region with hits
  254. or3366
    • Overlap with or3367(34)
  255. or3367
    • Overlap with or3366(34)
  256. or3428-or3429
    • Intergenic region with hits
  257. or3429
    • SHORT
  258. or3436
    • LONG
  259. or3437
    • LONG
  260. or3445-or3447
    • Intergenic region with hits
  261. or3479
    • SHORT
  262. or3504
    • Overlap with or3505(34)
  263. or3505
    • Overlap with or3504(34)
  264. or3515-or3518
    • Intergenic region with hits
  265. or3526
    • LONG
  266. or3535
    • SHORT
  267. or3536
    • LONG gene with <100 nt promoter
  268. or3556
    • SHORT
  269. or3572
    • LONG
  270. or3591
    • SHORT
  271. or3591-or3592
    • Intergenic region with hits
  272. or3626
    • LONG
  273. or3627-or3628
    • Intergenic region with hits
  274. or3644-or3646
    • Intergenic region with hits
  275. or3647
    • SHORT
  276. or3658
    • LONG
  277. or3659
    • LONG
  278. or3663
    • LONG
  279. or3664
    • Overlap with or3665(34)
  280. or3665
    • Overlap with or3664(34)
  281. or3675
    • Overlap with or3676(40)
  282. or3676
    • Overlap with or3675(40)
  283. or3683
    • Overlap with or3684(87)
  284. or3684
    • Overlap with or3685(40)
  285. or3685
    • Overlap with or3684(40)
  286. or3695
    • LONG
  287. or3701
    • LONG
  288. or3711-or3712
    • Intergenic region with hits
  289. or3739
    • LONG
  290. or3764-or3765
    • Intergenic region with hits
  291. or3783
    • LONG
  292. or3808
    • SHORT
  293. or3814-or3815
    • Intergenic region with hits
  294. or3817-or3818
    • Intergenic region with hits
  295. or3846
    • SHORT
  296. or3863-or3864
    • Intergenic region with hits
  297. or3871
    • LONG
  298. or3873
    • LONG
  299. or3887
    • LONG
  300. or3904-or3905
    • Intergenic region with hits
  301. or3908
    • SHORT
  302. or3914
    • Overlap with or3915(81)
  303. or3915
    • Overlap with or3914(81)
  304. or3917-or3918
    • Intergenic region with hits
  305. or3919
    • Overlap with or3920(36)
  306. or3918-or3920
    • Intergenic region with hits
  307. or3920
    • Overlap with or3919(36)
  308. or3926
    • LONG
  309. or3933
    • LONG
  310. or3938-or3939
    • Intergenic region with hits
  311. or3940-or3942
    • Intergenic region with hits
  312. or3963-or3965
    • Intergenic region with hits
Click on an anomaly in the left bar to view the associated alignment.