Flexistipes sinusarabici DSM 4947, Contig 44
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2371 predicted CDSs,
11 long genes,
50 short genes,
49 broken genes,
56 interrupted genes,
76 intergenic regions with hits,
242 total anomalies.
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View pseudogenes 		Gene prediction anomalies
Chart?chtt=&chs=400x180&chd=s:abcabba9&cht=p3&chl=long-0%%7cshort-2%%7cunique-3%%7cdubious-0%%7cbroken-2%%7cinterrupted-2%%7cambiguous-0%%7cok-91% 		Anomaly distribution
Chart?chtt=&chs=500x180&chd=s:hnnt9&cht=p3&chl=long-4%%7cshort-20%%7cbroken-20%%7cinterrupted-23%%7cputative+missed-31%
Defectlist
Alns
  1. or0009
    • Overlap with or0010(55)
  2. or0010
    • Overlap with or0009(55)
  3. or0047
  4. or0048
  5. or0062
  6. or0062-or0063
    • Intergenic region with hits
  7. or0063
  8. or0080
    • SHORT
  9. or0080-or0081
    • Intergenic region with hits
  10. or0117
    • SHORT
    • Overlap with or0118(37)
  11. or0118
    • Overlap with or0117(37)
  12. or0130
    • LONG
  13. or0141-or0142
    • Intergenic region with hits
  14. or0143
    • SHORT
  15. or0143-or0144
    • Intergenic region with hits
  16. or0170
    • LONG
  17. or0170-or0171
    • Intergenic region with hits
  18. or0171-or0172
    • Intergenic region with hits
  19. or0180-or0181
    • Intergenic region with hits
  20. or0191
    • LONG
  21. or0226
    • SHORT
  22. or0247-or0248
    • Intergenic region with hits
  23. or0254
    • SHORT
  24. or0260
    • Overlap with or0261(61)
  25. or0261
    • Overlap with or0260(61)
  26. or0262
  27. or0263
  28. or0280-or0281
    • Intergenic region with hits
  29. or0282
    • SHORT
  30. or0286-or0287
    • Intergenic region with hits
  31. or0308
    • SHORT
  32. or0350
  33. or0351
  34. or0372
    • LONG
  35. or0373
    • Overlap with or0374(31)
  36. or0374
    • Overlap with or0373(31)
  37. or0375-or0376
    • Intergenic region with hits
  38. or0394
    • Overlap with or0395(31)
  39. or0395
    • Overlap with or0394(31)
  40. or0411
    • SHORT
  41. or0420-or0421
    • Intergenic region with hits
  42. or0442-or0443
    • Intergenic region with hits
  43. or0487-or0489
    • Intergenic region with hits
  44. or0500
    • Overlap with or0501(31)
  45. or0501
    • Overlap with or0500(31)
  46. or0508
    • Overlap with or0509(43)
  47. or0509
    • Overlap with or0508(43)
  48. or0524
    • SHORT
  49. or0524-or0525
    • Intergenic region with hits
  50. or0529
    • Interrupted gene with or0531 
  51. or0530
    • SHORT
  52. or0530-or0531
    • Intergenic region with hits
  53. or0531
    • Interrupted gene with or0529 
  54. or0552
    • SHORT
  55. or0552-or0553
    • Intergenic region with hits
  56. or0553
    • SHORT
  57. or0553-or0554
    • Intergenic region with hits
  58. or0554
    • SHORT
  59. or0571
  60. or0572
  61. or0576-or0577
    • Intergenic region with hits
  62. or0600
    • LONG
  63. or0604-or0605
    • Intergenic region with hits
  64. or0614
    • Overlap with or0615(37)
  65. or0615
    • Overlap with or0614(37)
  66. or0618
    • Interrupted gene with or0620 
  67. or0620
    • Interrupted gene with or0618 
  68. or0622
    • SHORT
  69. or0671
    • Overlap with or0672(49)
  70. or0672
    • Overlap with or0671(49)
  71. or0672-or0673
    • Intergenic region with hits
  72. or0673
    • SHORT
  73. or0676-or0677
    • Intergenic region with hits
  74. or0687
    • LONG
  75. or0709
    • SHORT
  76. or0724
    • SHORT
  77. or0734
    • Interrupted gene with or0736 
  78. or0736
    • Interrupted gene with or0734 
  79. or0737-or0738
    • Intergenic region with hits
  80. or0738
  81. or0738-or0739
    • Intergenic region with hits
  82. or0739
  83. or0741
    • SHORT
  84. or0748
    • SHORT
  85. or0761
    • Overlap with or0762(31)
  86. or0762
    • Overlap with or0761(31)
  87. or0769
  88. or0770
  89. or0773-or0774
    • Intergenic region with hits
  90. or0811
    • SHORT
  91. or0812
  92. or0812-or0813
    • Intergenic region with hits
  93. or0813
  94. or0819
    • Broken gene with or0819  or0820 
    • Interrupted gene with or0820 
    • Overlap with or0820(31)
  95. or0820
    • Broken gene with or0819  or0820 
    • Interrupted gene with or0819 
    • Overlap with or0819(31)
  96. or0824
    • SHORT
  97. or0828
    • Interrupted gene with or0830 
  98. or0830
    • Interrupted gene with or0828 
  99. or0840
  100. or0841
  101. or0843
  102. or0844
  103. or0860
    • Overlap with or0861(45)
  104. or0861
    • Overlap with or0860(45)
  105. or0869-or0870
    • Intergenic region with hits
  106. or0880
    • Broken gene with or0880  or0881 
    • Interrupted gene with or0881 
    • Overlap with or0881(31)
  107. or0881
    • Broken gene with or0880  or0881 
    • Interrupted gene with or0880 
    • Overlap with or0880(31)
  108. or0882
  109. or0883
  110. or0889
    • SHORT
  111. or0908
    • Overlap with or0909(34)
  112. or0909
    • Overlap with or0908(34)
  113. or0927-or0928
    • Intergenic region with hits
  114. or0954-or0955
    • Intergenic region with hits
  115. or0958-or0959
    • Intergenic region with hits
  116. or_CrispR8
    • CrispR or_CrispR8 CRISPR + 1011560 1014319 rpt_unit_range="1011560..1011589"
  117. or0994
    • Overlap with or0995(58)
  118. or0995
    • Overlap with or0994(58)
  119. or1008
    • SHORT
  120. or1029
  121. or1030
  122. or1031
    • Overlap with or1032(61)
  123. or1032
    • LONG
    • Overlap with or1031(61)
  124. or1043-or1044
    • Intergenic region with hits
  125. or1044
    • SHORT
  126. or1053
    • Overlap with or1054(40)
  127. or1054
    • Overlap with or1053(40)
  128. or1056
    • Interrupted gene with or1058 
  129. or1058
    • Interrupted gene with or1056 
  130. or1109-or1110
    • Intergenic region with hits
  131. or1111-or1112
    • Intergenic region with hits
  132. or1145
    • Overlap with or1146(40)
  133. or1146
    • Overlap with or1145(40)
  134. or1173
    • Overlap with or1174(49)
  135. or1174
    • Overlap with or1173(49)
  136. or1217
    • Overlap with or1218(31)
  137. or1218
    • Overlap with or1217(31)
  138. or1270
    • SHORT
  139. or1274
    • SHORT
  140. or1277-or1278
    • Intergenic region with hits
  141. or1294
    • SHORT
  142. or1296
  143. or1297
  144. or1298
  145. or1302-or1303
    • Intergenic region with hits
  146. or1309-or1310
    • Intergenic region with hits
  147. or1316
    • Broken gene with or1316  or1317 
    • Interrupted gene with or1317 
    • Overlap with or1317(37)
  148. or1317
    • Broken gene with or1316  or1317 
    • Interrupted gene with or1316 
    • Overlap with or1316(37)
  149. or1349
    • SHORT
  150. or_CrispR1
    • CrispR or_CrispR1 CRISPR + 1428433 1429053 rpt_unit_range="1428433..1428469"
  151. or_CrispR2
    • CrispR or_CrispR2 CRISPR + 1429092 1429428 rpt_unit_range="1429092..1429129"
    • Overlap with or1354(123)
  152. or1354
    • Overlap with or_CrispR3(39)
    • Overlap with or_CrispR3(39)
  153. or_CrispR3
    • CrispR or_CrispR3 CRISPR + 1429541 1429801 rpt_unit_range="1429541..1429580"
    • Overlap with or1354(39)
  154. or_CrispR4
    • CrispR or_CrispR4 CRISPR + 1429911 1430685 rpt_unit_range="1429911..1429947"
  155. or1361
    • Interrupted gene with or1363 
  156. or1361-or1362
    • Intergenic region with hits
  157. or1363
    • Interrupted gene with or1361 
  158. or1373-or1374
    • Intergenic region with hits
  159. or1396-or1397
    • Intergenic region with hits
  160. or1400
    • Overlap with or1401(55)
  161. or1401
    • Overlap with or1400(55)
  162. or1414
    • SHORT
  163. or1430-or1431
    • Intergenic region with hits
  164. or1468-or1469
    • Intergenic region with hits
  165. or1470
    • Overlap with or1471(31)
  166. or1471
    • Overlap with or1470(31)
  167. or1491
    • Overlap with or1492(49)
  168. or1492
    • Overlap with or1491(49)
  169. or1501
    • SHORT
  170. or1503-or1504
    • Intergenic region with hits
  171. or1512-or1513
    • Intergenic region with hits
  172. or1522-or1523
    • Intergenic region with hits
  173. or1535
    • Overlap with or1536(43)
  174. or1536
    • Overlap with or1535(43)
  175. or1543
    • SHORT
  176. or1546
    • Overlap with or1547(46)
  177. or1547
    • Overlap with or1546(46)
  178. or1598
    • SHORT
  179. or_CrispR5
    • CrispR or_CrispR5 CRISPR + 1709833 1710142 rpt_unit_range="1709833..1709859"
  180. or_CrispR6
    • CrispR or_CrispR6 CRISPR + 1711148 1711762 rpt_unit_range="1711148..1711167"
  181. or_CrispR7
    • CrispR or_CrispR7 CRISPR + 1711803 1712652 rpt_unit_range="1711803..1711839"
  182. or1634
    • SHORT
  183. or1634-or1635
    • Intergenic region with hits
  184. or1635
    • SHORT
  185. or1655-or1656
    • Intergenic region with hits
  186. RNA_14-or1665
    • Intergenic region with hits
  187. or1672
    • Broken gene with or1672  or1673 
    • Overlap with or1673(60)
  188. or1688-or1689
    • Intergenic region with hits
  189. or1708
    • LONG
  190. or1717-or1718
    • Intergenic region with hits
  191. or1718
    • SHORT
  192. or1721-or1722
    • Intergenic region with hits
  193. or1722
    • SHORT
  194. or1729-or1730
    • Intergenic region with hits
  195. or1741
    • SHORT gene with BLASTx hit
  196. or1741-or1742
    • Intergenic region with hits
  197. or1743
    • Interrupted gene with or1746 
  198. or1744-or1745
    • Intergenic region with hits
  199. or1746
    • Interrupted gene with or1743 
  200. or1761-or1762
    • Intergenic region with hits
  201. or1764
    • Broken gene with or1764  or1765 
    • Interrupted gene with or1765 
    • Overlap with or1765(46)
  202. or1765
    • Broken gene with or1764  or1765 
    • Interrupted gene with or1764 
    • Overlap with or1764(46)
  203. or1777
    • LONG
  204. or1795
    • SHORT
  205. or1798
    • Interrupted gene with or1800 
  206. or1799-or1800
    • Intergenic region with hits
  207. or1800
    • Interrupted gene with or1798 
  208. or1802
    • Overlap with or1803(73)
  209. or1803
    • Overlap with or1802(73)
  210. or1819
    • SHORT
  211. or1819-or1820
    • Intergenic region with hits
  212. or1823
    • Overlap with or1822(52)
  213. or1867-or1868
    • Intergenic region with hits
  214. or1878
    • Interrupted gene with or1880 
  215. or1878-or1879
    • Intergenic region with hits
  216. or1880
    • Interrupted gene with or1878 
  217. or1880-or1881
    • Intergenic region with hits
  218. or1900
    • SHORT
  219. or1902
  220. or1903
  221. or1908
    • SHORT
  222. or1933
    • SHORT
  223. or1943
    • SHORT
  224. or1944-or1945
    • Intergenic region with hits
  225. or1945-or1946
    • Intergenic region with hits
  226. or1946
    • SHORT
  227. or1949-or1950
    • Intergenic region with hits
  228. or1950
    • SHORT
  229. or1954-or1955
    • Intergenic region with hits
  230. or2003-or2004
    • Intergenic region with hits
  231. or2009-or2010
    • Intergenic region with hits
  232. or2013
    • Overlap with or2014(61)
  233. or2014
    • Overlap with or2013(61)
  234. or2015
  235. or2016
  236. or2023
    • Overlap with or2022(46)
  237. or2053
    • Interrupted gene with or2055 
  238. or2055
    • Interrupted gene with or2053 
  239. or2070
    • LONG
  240. or2070-or2071
    • Intergenic region with hits
  241. or2085
    • Overlap with or2086(34)
  242. or2086
    • Overlap with or2085(34)
  243. or2093
    • SHORT
  244. or2093-or2094
    • Intergenic region with hits
  245. or2095
    • Broken gene with or2095  or2096 
    • Interrupted gene with or2096 
    • Overlap with or2096(31)
  246. or2096
    • Broken gene with or2095  or2096 
    • Interrupted gene with or2095 
    • Overlap with or2095(31)
  247. or2109-or2110
    • Intergenic region with hits
  248. or2110
    • SHORT
  249. or2145-or2146
    • Intergenic region with hits
  250. or2152
    • SHORT
  251. or2152-or2153
    • Intergenic region with hits
  252. or2156
  253. or2157
  254. or2236
    • Overlap with or2237(55)
  255. or2237
    • Overlap with or2236(55)
  256. or2268
    • Interrupted gene with or2270 
  257. or2270
    • Interrupted gene with or2268 
  258. or2274-or2275
    • Intergenic region with hits
  259. or2280-or2281
    • Intergenic region with hits
  260. or2287-or2288
    • Intergenic region with hits
  261. or2291
    • SHORT
  262. or2297
  263. or2297-or2298
    • Intergenic region with hits
  264. or2298
  265. or2299
  266. or2305
    • Interrupted gene with or2308 
  267. or2308
    • Interrupted gene with or2305 
  268. or2310
    • Overlap with or2311(49)
  269. or2311
    • Overlap with or2310(49)
  270. or2315
    • Overlap with or2316(31)
  271. or2316
    • Overlap with or2315(31)
  272. or2322
  273. or2322-or2323
    • Intergenic region with hits
  274. or2323
  275. or2335
    • Overlap with or2336(31)
  276. or2336
    • Overlap with or2335(31)
  277. or2342
    • LONG
  278. or2347
    • Interrupted gene with or2349 
  279. or2349
    • Interrupted gene with or2347 
  280. or2351
    • SHORT
  281. or2351-or2352
    • Intergenic region with hits
Click on an anomaly in the left bar to view the associated alignment.