Marinomonas mediterranea MMB-1, Contig 398
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4220 predicted CDSs,
61 long genes,
92 short genes,
42 broken genes,
20 interrupted genes,
139 intergenic regions with hits,
354 total anomalies.
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View pseudogenes 		Gene prediction anomalies
Chart?chtt=&chs=400x180&chd=s:abeaaaa9&cht=p3&chl=long-1%%7cshort-2%%7cunique-7%%7cdubious-0%%7cbroken-0%%7cinterrupted-0%%7cambiguous-0%%7cok-90% 		Anomaly distribution
Chart?chtt=&chs=500x180&chd=s:anrh9&cht=p3&chl=long-17%%7cshort-25%%7cbroken-11%%7cinterrupted-5%%7cputative+missed-39%
Defectlist
Alns
  1. or0008
    • LONG
  2. or0024
    • LONG gene with <100 nt promoter
  3. or0035
    • LONG
  4. or0073
    • LONG
  5. or0090
    • LONG
  6. or0093
    • Overlap with or0094(46)
  7. or0094
    • Overlap with or0093(46)
  8. or0102
    • SHORT
  9. or0112-or0113
    • Intergenic region with hits
  10. or0114-or0115
    • Intergenic region with hits
  11. or0115-or0116
    • Intergenic region with hits
  12. or0208
    • LONG
  13. or0216
    • LONG
  14. or0221
    • Overlap with or0222(37)
  15. or0222
    • LONG
    • Overlap with or0221(37)
  16. or0231-or0232
    • Intergenic region with hits
  17. or0254-or0255
    • Intergenic region with hits
  18. or0267
    • SHORT
  19. or0267-or0268
    • Intergenic region with hits
  20. or0270-or0271
    • Intergenic region with hits
  21. or0293
    • LONG
  22. or0337
    • LONG
  23. or0347-or0348
    • Intergenic region with hits
  24. or0348
    • SHORT
  25. or0366
    • SHORT
  26. or0409
    • Overlap with or0410(37)
  27. or0410
    • LONG
    • Overlap with or0409(37)
  28. or0411-or0414
    • Intergenic region with hits
  29. or0458
    • SHORT
  30. or0458-or0461
    • Intergenic region with hits
  31. or0461
    • SHORT
  32. or0461-or0462
    • Intergenic region with hits
  33. or0552
    • Overlap with or0553(31)
  34. or0553
    • Overlap with or0552(31)
  35. or0551-or0554
    • Intergenic region with hits
  36. or0554-or0555
    • Intergenic region with hits
  37. or0555
    • SHORT
  38. or0555-ssrA
    • Intergenic region with hits
  39. or0615
    • Overlap with or0616(46)
  40. or0616
    • Overlap with or0615(46)
  41. or0622-or0623
    • Intergenic region with hits
  42. or0624-or0625
    • Intergenic region with hits
  43. or0625-or0626
    • Intergenic region with hits
  44. or0626
  45. or0626-or0627
    • Intergenic region with hits
  46. or0627
  47. or0627-or0628
    • Intergenic region with hits
  48. or0628-or0629
    • Intergenic region with hits
  49. or0629
    • SHORT
  50. or0629-or0630
    • Intergenic region with hits
  51. or0636
    • Overlap with or0637(88)
  52. or0637
    • Overlap with or0636(88)
  53. or0639-or0640
    • Intergenic region with hits
  54. or0641
  55. or0642
  56. or0642-or0643
    • Intergenic region with hits
  57. or0643-or0644
    • Intergenic region with hits
  58. or0644-or0647
    • Intergenic region with hits
  59. or0650-or0654
    • Intergenic region with hits
  60. or0664
    • LONG
  61. or_CrispR3
    • CrispR or_CrispR3 CRISPR + 710416 710944 rpt_unit_range="710416..710451"
  62. or0673
    • SHORT
  63. or0673-or0674
    • Intergenic region with hits
  64. or0674
    • LONG
  65. or0686
    • LONG
  66. or0721
    • LONG
  67. or0735
    • LONG
  68. or0737
    • LONG
  69. or0748
    • SHORT
  70. or0809
  71. or0810
  72. or0817
  73. or0817-or0818
    • Intergenic region with hits
  74. or0818
  75. or0820-or0821
    • Intergenic region with hits
  76. or0821
    • SHORT
  77. or0823
    • SHORT
  78. or0823-or0824
    • Intergenic region with hits
  79. or0824
    • SHORT
  80. or0856-or0857
    • Intergenic region with hits
  81. or0859
    • SHORT
  82. or0859-or0860
    • Intergenic region with hits
  83. or0883
    • LONG
  84. or0895
    • Overlap with or0896(94)
  85. or0896
    • Overlap with or0895(94)
  86. or0899
    • SHORT
  87. or0899-or0903
    • Intergenic region with hits
  88. or0927
    • LONG
  89. or0986
    • LONG
  90. or0994-or0995
    • Intergenic region with hits
  91. or0995
    • SHORT
  92. or1024
    • LONG
  93. or1041
    • LONG
  94. or1069
    • SHORT
  95. or1081
    • LONG
  96. or1103
    • SHORT
  97. or1112
    • LONG
  98. or1134
    • LONG
  99. or1136
    • LONG
  100. or1160-or1161
    • Intergenic region with hits
  101. or1161
    • SHORT
  102. or1162
    • Broken gene with or1162  or1163 
    • Interrupted gene with or1163 
    • Overlap with or1163(49)
  103. or1163
    • Broken gene with or1162  or1163 
    • Interrupted gene with or1162 
    • Overlap with or1162(49)
  104. or1164
    • SHORT
  105. or1189
    • SHORT
  106. or1189-or1190
    • Intergenic region with hits
  107. or1199
    • LONG
  108. or1249-or1251
    • Intergenic region with hits
  109. or1265
    • LONG
  110. or1284
    • LONG
  111. or1296
    • LONG
  112. or1337
    • SHORT
    • Overlap with or1338(58)
  113. or1338
    • Overlap with or1337(58)
  114. or1350
    • SHORT
  115. or1358
    • SHORT
  116. or1389-or1394
    • Intergenic region with hits
  117. or1397
  118. or1397-or1398
    • Intergenic region with hits
  119. or1398
  120. or1400
    • SHORT
  121. or1403-or1404
    • Intergenic region with hits
  122. or1405-or1406
    • Intergenic region with hits
  123. or1413
    • SHORT
  124. or1414-or1415
    • Intergenic region with hits
  125. or1442
    • LONG
  126. or1449
    • LONG
  127. or1470-or1471
    • Intergenic region with hits
  128. or1471
    • SHORT
  129. or1480
    • LONG
  130. or1492
    • SHORT
  131. or1497
    • LONG
  132. or1505-or1507
    • Intergenic region with hits
  133. or1507
    • SHORT
  134. or1520
    • SHORT
  135. or1531
    • LONG
  136. or1545-RNA_67
    • Intergenic region with hits
  137. or_CrispR4
    • CrispR or_CrispR4 CRISPR + 1731633 1732016 rpt_unit_range="1731633..1731686"
  138. or1565-or1566
    • Intergenic region with hits
  139. or1578-or1581
    • Intergenic region with hits
  140. or1581
    • Overlap with or1582(48)
  141. or1582
    • Overlap with or1581(48)
  142. or1604
    • Overlap with or1605(54)
  143. or1605
    • Overlap with or1604(54)
  144. or1603-or1606
    • Intergenic region with hits
  145. or1606
    • SHORT
  146. or1632
    • SHORT
  147. or1653
    • LONG
  148. or1657-or1658
    • Intergenic region with hits
  149. or1658
    • SHORT
  150. or1659
    • Overlap with or1660(81)
  151. or1660
    • Overlap with or1659(81)
  152. or1661-or1665
    • Intergenic region with hits
  153. or1667
    • SHORT
  154. or1671
    • SHORT
  155. or1671-or1672
    • Intergenic region with hits
  156. or1672-or1673
    • Intergenic region with hits
  157. or1674
    • LONG
  158. or1699
    • SHORT
  159. or1700
    • SHORT
  160. or1724-or1725
    • Intergenic region with hits
  161. or1749-or1750
    • Intergenic region with hits
  162. or1753-or1754
    • Intergenic region with hits
  163. or1780
    • Overlap with or1781(57)
  164. or1781
    • LONG
    • Overlap with or1780(57)
  165. or1814
    • SHORT
  166. or1817-or1821
    • Intergenic region with hits
  167. or1841
    • Overlap with or1842(40)
  168. or1842
    • Overlap with or1841(40)
  169. or1849-or1850
    • Intergenic region with hits
  170. or1860-or1861
    • Intergenic region with hits
  171. or1864
    • SHORT
  172. or1868-or1869
    • Intergenic region with hits
  173. or1871-or1874
    • Intergenic region with hits
  174. or1874-or1875
    • Intergenic region with hits
  175. ffs-or1886
    • Intergenic region with hits
  176. or1888
  177. or1889
  178. or1890
  179. or1890-or1891
    • Intergenic region with hits
  180. or1891
  181. or1899
    • LONG
  182. or1912-or1913
    • Intergenic region with hits
  183. or1914-or1915
    • Intergenic region with hits
  184. or1924
    • SHORT
  185. or1932
    • LONG
  186. or1936-or1939
    • Intergenic region with hits
  187. or1939
  188. or1940
  189. or1979
    • Overlap with or1980(65)
  190. or1980
    • Overlap with or1979(65)
  191. or2017
    • LONG
  192. or2028
    • SHORT
  193. or2102-or2104
    • Intergenic region with hits
  194. or2104
  195. or2104-or2105
    • Intergenic region with hits
  196. or2107-or2108
    • Intergenic region with hits
  197. or2108
    • SHORT
  198. or2109
    • SHORT
  199. or2109-or2110
    • Intergenic region with hits
  200. or2111
    • LONG
  201. or2115
    • Overlap with or2116(31)
  202. or2116
    • Overlap with or2115(31)
  203. or2118
    • SHORT
  204. or2128
  205. or2129
  206. or2180
    • LONG
  207. or2186-or2188
    • Intergenic region with hits
  208. or2222-or2223
    • Intergenic region with hits
  209. or2286
    • SHORT
  210. or2334
    • Overlap with or2335(43)
  211. or2335
    • Overlap with or2334(43)
  212. or2349-or2351
    • Intergenic region with hits
  213. or2351
  214. or2351-or2352
    • Intergenic region with hits
  215. or2352
  216. or2352-or2353
    • Intergenic region with hits
  217. or2360-or2364
    • Intergenic region with hits
  218. or2365-or2366
    • Intergenic region with hits
  219. or2368
    • LONG
  220. or2368-or2369
    • Intergenic region with hits
  221. or2371
    • LONG
  222. or2375
    • LONG
  223. or2383
    • LONG
  224. or2385-or2386
    • Intergenic region with hits
  225. or2386
  226. or2387
  227. or2387-or2388
    • Intergenic region with hits
  228. or2405-or2406
    • Intergenic region with hits
  229. or2407
    • SHORT
  230. or2407-or2408
    • Intergenic region with hits
  231. or2408
  232. or2408-or2409
    • Intergenic region with hits
  233. or2409
  234. or2415-or2416
    • Intergenic region with hits
  235. or2417
    • LONG
  236. or2417-or2418
    • Intergenic region with hits
  237. or2418
    • SHORT
  238. or2419-or2422
    • Intergenic region with hits
  239. or2465-RNA_61
    • Intergenic region with hits
  240. or2477
    • SHORT
  241. or2477-or2478
    • Intergenic region with hits
  242. or2507-or2508
    • Intergenic region with hits
  243. or2515
    • SHORT
  244. or2535
    • Overlap with or2536(55)
  245. or2536
    • Overlap with or2535(55)
  246. or2537-or2538
    • Intergenic region with hits
  247. or2538
    • SHORT
  248. or2616-or2617
    • Intergenic region with hits
  249. or2618
    • SHORT
  250. or2620
  251. or2621
  252. or2623
    • Overlap with or2624(34)
  253. or2624
    • Overlap with or2623(34)
  254. or2660-or2664
    • Intergenic region with hits
  255. or2664
    • SHORT
  256. or2679
    • LONG
  257. or2707
    • SHORT
  258. or2725
    • SHORT
  259. or2726
    • SHORT
  260. or2726-or2727
    • Intergenic region with hits
  261. or2728
  262. or2729
  263. or2731
    • Overlap with or2732(57)
  264. or2732
    • Overlap with or2731(57)
  265. or2731-or2733
    • Intergenic region with hits
  266. or2734
    • SHORT
  267. or2748-or2749
    • Intergenic region with hits
  268. or2751-or2754
    • Intergenic region with hits
  269. or2754-or2755
    • Intergenic region with hits
  270. or2755-RNA_55
    • Intergenic region with hits
  271. or2774-or2776
    • Intergenic region with hits
  272. or2778
    • SHORT
  273. or2780
    • SHORT
  274. or2782
    • SHORT
  275. or2782-or2785
    • Intergenic region with hits
  276. or2789
    • SHORT
  277. or2789-or2792
    • Intergenic region with hits
  278. or2811-RNA_53
    • Intergenic region with hits
  279. or2815
    • Overlap with or2816(49)
  280. or2838
    • SHORT
  281. or2838-or2839
    • Intergenic region with hits
  282. or2853
  283. or2853-or2854
    • Intergenic region with hits
  284. or2854
  285. or2893
    • Overlap with or2894(58)
  286. or2894
    • Overlap with or2893(58)
  287. or2923
    • SHORT
  288. or2935
    • Overlap with or2936(43)
  289. or2936
    • Overlap with or2935(43)
  290. or2940
    • SHORT
  291. or2958
    • SHORT
  292. or2978
    • LONG
  293. or3021
    • SHORT
  294. or3021-or3022
    • Intergenic region with hits
  295. or3033
    • SHORT
  296. or3035
    • SHORT
  297. or3042-or3045
    • Intergenic region with hits
  298. or3056
    • Overlap with or3057(34)
  299. or3057
    • Overlap with or3056(34)
  300. or3115
    • LONG
  301. or3115-or3116
    • Intergenic region with hits
  302. or3122-or3123
    • Intergenic region with hits
  303. or3152
    • SHORT
  304. or3156
    • SHORT
  305. or3166-or3167
    • Intergenic region with hits
  306. or3167
    • SHORT
  307. or3185
    • LONG
  308. or3199
    • LONG
  309. or3199-or3200
    • Intergenic region with hits
  310. or3226
    • Overlap with or3227(55)
  311. or3227
    • Overlap with or3226(55)
  312. or3275
    • SHORT
  313. or3275-or3276
    • Intergenic region with hits
  314. or3277-or3278
    • Intergenic region with hits
  315. or3278
    • SHORT
  316. or_CrispR1
    • CrispR or_CrispR1 CRISPR + 3643810 3646958 rpt_unit_range="3643810..3643838"
  317. or3338
    • SHORT
  318. or3377
    • Overlap with or3378(58)
  319. or3378
    • Overlap with or3377(58)
  320. or3457
    • SHORT
  321. or3458-or3459
    • Intergenic region with hits
  322. or3485-or3486
    • Intergenic region with hits
  323. or3486
    • LONG
  324. or3487
  325. or3488
  326. or3489
  327. or3490
  328. or3504-or3506
    • Intergenic region with hits
  329. or3508
    • SHORT
  330. or3509
    • SHORT
  331. or3516
    • SHORT
  332. or3516-or3517
    • Intergenic region with hits
  333. or_CrispR2
    • CrispR or_CrispR2 CRISPR + 3896481 3898668 rpt_unit_range="3896481..3896509"
  334. or3558
    • LONG
  335. or3634
    • SHORT
  336. or3634-or3635
    • Intergenic region with hits
  337. or3635
    • SHORT
  338. or3659
    • SHORT
  339. or3674-or3676
    • Intergenic region with hits
  340. or3677-or3684
    • Intergenic region with hits
  341. or3700
    • LONG
  342. or3715-or3718
    • Intergenic region with hits
  343. or3723
    • Overlap with or3724(76)
  344. or3724
    • Overlap with or3723(76)
  345. or3741
    • SHORT
  346. or3741-or3745
    • Intergenic region with hits
  347. or3774
    • SHORT
  348. or3838
    • LONG gene with <100 nt promoter
  349. or3840
    • SHORT
  350. or3845-or3848
    • Intergenic region with hits
  351. or3855-or3856
    • Intergenic region with hits
  352. or3920
    • SHORT
  353. or3920-or3921
    • Intergenic region with hits
  354. or3939-or3944
    • Intergenic region with hits
  355. or3955-or3956
    • Intergenic region with hits
  356. or3964
    • LONG
  357. or3965
    • Overlap with or3966(98)
  358. or3966
    • Overlap with or3965(98)
  359. or3988
    • SHORT
  360. or4017
    • SHORT
  361. or4030
    • LONG
  362. or4038
    • LONG
  363. or4044-or4045
    • Intergenic region with hits
  364. or4050-or4051
    • Intergenic region with hits
  365. or4051
    • LONG
  366. or4051-or4053
    • Intergenic region with hits
  367. or4053
    • SHORT
  368. or4053-or4054
    • Intergenic region with hits
  369. or4056-or4057
    • Intergenic region with hits
  370. or4057
    • SHORT
  371. or4064
    • SHORT
  372. or4064-or4066
    • Intergenic region with hits
  373. or4066
    • SHORT
  374. or4066-or4067
    • Intergenic region with hits
  375. or4075-or4076
    • Intergenic region with hits
  376. or4076
    • SHORT
  377. or4077
  378. or4078
  379. or4078-or4079
    • Intergenic region with hits
  380. or4079-or4080
    • Intergenic region with hits
  381. or4141
  382. or4141-or4142
    • Intergenic region with hits
  383. or4142
  384. or4143
  385. or4174-or4177
    • Intergenic region with hits
  386. or4179-or4180
    • Intergenic region with hits
Click on an anomaly in the left bar to view the associated alignment.